Protein–RNA interactions for Protein: Q00723

PRP38, Pre-mRNA-splicing factor 38, yeastyeast

Predicted RBP Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP38Q00723 ROX1YPR065W 1107 nt1.83□□□□□ -2.12
PRP38Q00723 PPN1YDR452W 2025 nt1.83□□□□□ -2.12
PRP38Q00723 RTT101YJL047C 2529 nt1.82□□□□□ -2.12
PRP38Q00723 VPS52YDR484W 1926 nt1.82□□□□□ -2.12
PRP38Q00723 VAR1Q0140 1197 nt1.82□□□□□ -2.12
PRP38Q00723 VOA1YGR106C 798 nt1.82□□□□□ -2.12
PRP38Q00723 SNC1YAL030W 354 nt1.82□□□□□ -2.12
PRP38Q00723 TMA7YLR262C-A 195 nt1.82□□□□□ -2.12
PRP38Q00723 GRX8YLR364W 330 nt1.82□□□□□ -2.12
PRP38Q00723 YMR052C-AYMR052C-A 366 nt1.82□□□□□ -2.12
PRP38Q00723 YMR324CYMR324C 243 nt1.82□□□□□ -2.12
PRP38Q00723 RUF22RUF22 515 nt1.82□□□□□ -2.12
PRP38Q00723 TSC3YBR058C-A 243 nt1.82□□□□□ -2.12
PRP38Q00723 RPB5YBR154C 648 nt1.82□□□□□ -2.12
PRP38Q00723 PDR8YLR266C 2106 nt1.82□□□□□ -2.12
PRP38Q00723 DNF3YMR162C 4971 nt1.81□□□□□ -2.12
PRP38Q00723 VPH1YOR270C 2523 nt1.81□□□□□ -2.12
PRP38Q00723 GUP1YGL084C 1683 nt1.81□□□□□ -2.12
PRP38Q00723 HMLALPHA2YCL067C 633 nt1.81□□□□□ -2.12
PRP38Q00723 MATALPHA2YCR039C 633 nt1.81□□□□□ -2.12
PRP38Q00723 CDC50YCR094W 1176 nt1.81□□□□□ -2.12
PRP38Q00723 YHR125WYHR125W 306 nt1.81□□□□□ -2.12
PRP38Q00723 YLR222C-AYLR222C-A 231 nt1.81□□□□□ -2.12
PRP38Q00723 YOL159C-AYOL159C-A 273 nt1.81□□□□□ -2.12
PRP38Q00723 snR54snR54 86 nt1.81□□□□□ -2.12
PRP38Q00723 MGA2YIR033W 3342 nt1.81□□□□□ -2.12
PRP38Q00723 IRC10YOL015W 1761 nt1.8□□□□□ -2.12
PRP38Q00723 YDL041WYDL041W 354 nt1.8□□□□□ -2.12
PRP38Q00723 SMD1YGR074W 441 nt1.8□□□□□ -2.12
PRP38Q00723 TEN1YLR010C 483 nt1.8□□□□□ -2.12
PRP38Q00723 VTI1YMR197C 654 nt1.8□□□□□ -2.12
PRP38Q00723 YPR039WYPR039W 336 nt1.8□□□□□ -2.12
PRP38Q00723 VPS34YLR240W 2628 nt1.8□□□□□ -2.12
PRP38Q00723 YGR025WYGR025W 303 nt1.79□□□□□ -2.12
PRP38Q00723 NBL1YHR199C-A 222 nt1.79□□□□□ -2.12
PRP38Q00723 YHR214W-AYHR214W-A 486 nt1.79□□□□□ -2.12
PRP38Q00723 YAR068WYAR068W 486 nt1.79□□□□□ -2.12
PRP38Q00723 YMR153C-AYMR153C-A 336 nt1.79□□□□□ -2.12
PRP38Q00723 RTC6YPL183W-A 282 nt1.79□□□□□ -2.12
PRP38Q00723 AGC1YPR021C 2709 nt1.79□□□□□ -2.12
PRP38Q00723 BUD2YKL092C 3315 nt1.79□□□□□ -2.12
PRP38Q00723 VPS8YAL002W 3825 nt1.79□□□□□ -2.12
PRP38Q00723 GCN2YDR283C 4980 nt1.78□□□□□ -2.12
PRP38Q00723 HER1YOR227W 3741 nt1.78□□□□□ -2.12
PRP38Q00723 RTP1YMR185W 2946 nt1.78□□□□□ -2.12
PRP38Q00723 snR79snR79 84 nt1.78□□□□□ -2.12
PRP38Q00723 LSO2YGR169C-A 279 nt1.78□□□□□ -2.12
PRP38Q00723 YHR139C-AYHR139C-A 312 nt1.78□□□□□ -2.12
PRP38Q00723 YLR101CYLR101C 396 nt1.78□□□□□ -2.12
PRP38Q00723 CDC33YOL139C 642 nt1.78□□□□□ -2.12
PRP38Q00723 snR13snR13 124 nt1.78□□□□□ -2.12
PRP38Q00723 SEC22YLR268W 645 nt1.77□□□□□ -2.13
PRP38Q00723 TIF11YMR260C 462 nt1.77□□□□□ -2.13
PRP38Q00723 SOK2YMR016C 2358 nt1.77□□□□□ -2.13
PRP38Q00723 DIS3YOL021C 3006 nt1.77□□□□□ -2.13
PRP38Q00723 GDS1YOR355W 1569 nt1.76□□□□□ -2.13
PRP38Q00723 DFG16YOR030W 1860 nt1.76□□□□□ -2.13
PRP38Q00723 ATP17YDR377W 306 nt1.76□□□□□ -2.13
PRP38Q00723 YER006C-AYER006C-A 318 nt1.76□□□□□ -2.13
PRP38Q00723 YER068C-AYER068C-A 432 nt1.76□□□□□ -2.13
PRP38Q00723 HUR1YGL168W 333 nt1.76□□□□□ -2.13
PRP38Q00723 MSL1YIR009W 336 nt1.76□□□□□ -2.13
PRP38Q00723 RPA34YJL148W 702 nt1.76□□□□□ -2.13
PRP38Q00723 YLR264C-AYLR264C-A 117 nt1.76□□□□□ -2.13
PRP38Q00723 YMR272W-BYMR272W-B 108 nt1.76□□□□□ -2.13
PRP38Q00723 CMC2YBL059C-A 330 nt1.76□□□□□ -2.13
PRP38Q00723 YOR392WYOR392W 444 nt1.76□□□□□ -2.13
PRP38Q00723 EGD1YPL037C 474 nt1.76□□□□□ -2.13
PRP38Q00723 CDC60YPL160W 3273 nt1.76□□□□□ -2.13
PRP38Q00723 KAR3YPR141C 2190 nt1.76□□□□□ -2.13
PRP38Q00723 SWT1YOR166C 1377 nt1.75□□□□□ -2.13
PRP38Q00723 TRL1YJL087C 2484 nt1.75□□□□□ -2.13
PRP38Q00723 VPS35YJL154C 2835 nt1.75□□□□□ -2.13
PRP38Q00723 CDC53YDL132W 2448 nt1.75□□□□□ -2.13
PRP38Q00723 YNL324WYNL324W 396 nt1.75□□□□□ -2.13
PRP38Q00723 SNC2YOR327C 348 nt1.75□□□□□ -2.13
PRP38Q00723 VMR1YHL035C 4779 nt1.75□□□□□ -2.13
PRP38Q00723 MSS11YMR164C 2277 nt1.75□□□□□ -2.13
PRP38Q00723 NIC96YFR002W 2520 nt1.75□□□□□ -2.13
PRP38Q00723 RUD3YOR216C 1455 nt1.75□□□□□ -2.13
PRP38Q00723 SPO22YIL073C 2928 nt1.74□□□□□ -2.13
PRP38Q00723 COX1Q0045 1605 nt1.74□□□□□ -2.13
PRP38Q00723 PRE4YFR050C 801 nt1.74□□□□□ -2.13
PRP38Q00723 YGR042WYGR042W 816 nt1.74□□□□□ -2.13
PRP38Q00723 YBR032WYBR032W 303 nt1.74□□□□□ -2.13
PRP38Q00723 YOR333CYOR333C 417 nt1.74□□□□□ -2.13
PRP38Q00723 RTT107YHR154W 3213 nt1.74□□□□□ -2.13
PRP38Q00723 CHC1YGL206C 4962 nt1.74□□□□□ -2.13
PRP38Q00723 SPC72YAL047C 1869 nt1.73□□□□□ -2.13
PRP38Q00723 TUS1YLR425W 3924 nt1.73□□□□□ -2.13
PRP38Q00723 CFT2YLR115W 2580 nt1.73□□□□□ -2.13
PRP38Q00723 YSW1YBR148W 1830 nt1.73□□□□□ -2.13
PRP38Q00723 PEP1YBL017C 4740 nt1.72□□□□□ -2.13
PRP38Q00723 CRM1YGR218W 3255 nt1.72□□□□□ -2.13
PRP38Q00723 HOP2YGL033W 657 nt1.72□□□□□ -2.13
PRP38Q00723 CRG1YHR209W 876 nt1.72□□□□□ -2.13
PRP38Q00723 YKL063CYKL063C 504 nt1.72□□□□□ -2.13
PRP38Q00723 YPR177CYPR177C 372 nt1.72□□□□□ -2.13
PRP38Q00723 CDC24YAL041W 2565 nt1.72□□□□□ -2.13
PRP38Q00723 LRE1YCL051W 1752 nt1.72□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 28.4 ms