Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CDKN2DP55273 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
CDKN2DP55273 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKN2DP55273 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKN2DP55273 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.1■□□□□ 0.81
CDKN2DP55273 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2DP55273 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2DP55273 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.09■□□□□ 0.81
CDKN2DP55273 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CDKN2DP55273 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2DP55273 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.09■□□□□ 0.81
CDKN2DP55273 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CDKN2DP55273 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2DP55273 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2DP55273 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2DP55273 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2DP55273 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.09■□□□□ 0.81
CDKN2DP55273 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.09■□□□□ 0.81
CDKN2DP55273 AC016769.1-201ENST00000409132 1010 ntBASIC20.09■□□□□ 0.81
CDKN2DP55273 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CDKN2DP55273 AC006015.1-201ENST00000429970 570 ntBASIC20.09■□□□□ 0.81
CDKN2DP55273 CNN2P6-201ENST00000439038 900 ntBASIC20.09■□□□□ 0.81
CDKN2DP55273 DUX4L16-201ENST00000555130 1264 ntBASIC20.09■□□□□ 0.81
CDKN2DP55273 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2DP55273 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.09■□□□□ 0.81
CDKN2DP55273 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CDKN2DP55273 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CDKN2DP55273 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2DP55273 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2DP55273 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2DP55273 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2DP55273 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.09■□□□□ 0.81
CDKN2DP55273 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDKN2DP55273 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.08■□□□□ 0.81
CDKN2DP55273 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKN2DP55273 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDKN2DP55273 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKN2DP55273 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKN2DP55273 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKN2DP55273 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CDKN2DP55273 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.08■□□□□ 0.81
CDKN2DP55273 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDKN2DP55273 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.08■□□□□ 0.81
CDKN2DP55273 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.08■□□□□ 0.81
CDKN2DP55273 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.08■□□□□ 0.81
CDKN2DP55273 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDKN2DP55273 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDKN2DP55273 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDKN2DP55273 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDKN2DP55273 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CDKN2DP55273 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2DP55273 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2DP55273 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2DP55273 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CDKN2DP55273 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2DP55273 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2DP55273 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.07■□□□□ 0.8
CDKN2DP55273 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.07■□□□□ 0.8
CDKN2DP55273 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CDKN2DP55273 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.07■□□□□ 0.8
CDKN2DP55273 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2DP55273 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2DP55273 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.07■□□□□ 0.8
CDKN2DP55273 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.07■□□□□ 0.8
CDKN2DP55273 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2DP55273 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2DP55273 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2DP55273 DPP3P2-201ENST00000416030 1696 ntBASIC20.07■□□□□ 0.8
CDKN2DP55273 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2DP55273 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2DP55273 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2DP55273 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2DP55273 CYP21A1P-202ENST00000354927 1481 ntBASIC20.06■□□□□ 0.8
CDKN2DP55273 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKN2DP55273 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2DP55273 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2DP55273 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CDKN2DP55273 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CDKN2DP55273 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDKN2DP55273 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKN2DP55273 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKN2DP55273 AC087633.2-202ENST00000565166 1439 ntBASIC20.06■□□□□ 0.8
CDKN2DP55273 AL162412.1-201ENST00000567129 965 ntBASIC20.06■□□□□ 0.8
CDKN2DP55273 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.06■□□□□ 0.8
CDKN2DP55273 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.06■□□□□ 0.8
CDKN2DP55273 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKN2DP55273 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2DP55273 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2DP55273 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKN2DP55273 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2DP55273 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDKN2DP55273 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2DP55273 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKN2DP55273 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.05■□□□□ 0.8
CDKN2DP55273 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKN2DP55273 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDKN2DP55273 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKN2DP55273 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKN2DP55273 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKN2DP55273 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms