Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CDR1P51861 AF106564.1-201ENST00000607058 2553 ntBASIC22.12■■□□□ 1.13
CDR1P51861 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
CDR1P51861 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDR1P51861 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDR1P51861 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDR1P51861 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDR1P51861 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
CDR1P51861 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.11■■□□□ 1.13
CDR1P51861 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDR1P51861 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDR1P51861 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.11■■□□□ 1.13
CDR1P51861 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDR1P51861 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
CDR1P51861 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDR1P51861 AL355472.2-201ENST00000422958 438 ntBASIC22.11■■□□□ 1.13
CDR1P51861 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.11■■□□□ 1.13
CDR1P51861 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.11■■□□□ 1.13
CDR1P51861 AC142086.2-201ENST00000569753 217 ntBASIC22.11■■□□□ 1.13
CDR1P51861 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.11■■□□□ 1.13
CDR1P51861 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.11■■□□□ 1.13
CDR1P51861 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.11■■□□□ 1.13
CDR1P51861 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDR1P51861 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDR1P51861 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDR1P51861 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
CDR1P51861 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
CDR1P51861 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.11■■□□□ 1.13
CDR1P51861 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
CDR1P51861 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.11■■□□□ 1.13
CDR1P51861 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDR1P51861 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDR1P51861 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDR1P51861 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDR1P51861 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC22.1■■□□□ 1.13
CDR1P51861 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDR1P51861 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDR1P51861 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDR1P51861 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
CDR1P51861 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
CDR1P51861 MIPEPP3-201ENST00000412105 444 ntBASIC22.1■■□□□ 1.13
CDR1P51861 BX276092.2-201ENST00000417668 665 ntBASIC22.1■■□□□ 1.13
CDR1P51861 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.1■■□□□ 1.13
CDR1P51861 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDR1P51861 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDR1P51861 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDR1P51861 AL591742.1-201ENST00000604433 565 ntBASIC22.1■■□□□ 1.13
CDR1P51861 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.1■■□□□ 1.13
CDR1P51861 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDR1P51861 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDR1P51861 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDR1P51861 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.1■■□□□ 1.13
CDR1P51861 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
CDR1P51861 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDR1P51861 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CDR1P51861 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDR1P51861 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
CDR1P51861 AC091799.1-201ENST00000422823 811 ntBASIC22.09■■□□□ 1.13
CDR1P51861 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDR1P51861 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.09■■□□□ 1.13
CDR1P51861 AC007322.4-201ENST00000509611 723 ntBASIC22.09■■□□□ 1.13
CDR1P51861 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDR1P51861 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.09■■□□□ 1.13
CDR1P51861 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.09■■□□□ 1.13
CDR1P51861 AC008694.1-202ENST00000636953 945 ntBASIC22.09■■□□□ 1.13
CDR1P51861 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.09■■□□□ 1.13
CDR1P51861 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.09■■□□□ 1.13
CDR1P51861 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDR1P51861 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CDR1P51861 AIRN-201ENST00000601203 4374 ntBASIC22.09■■□□□ 1.13
CDR1P51861 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CDR1P51861 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDR1P51861 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDR1P51861 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.09■■□□□ 1.13
CDR1P51861 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDR1P51861 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDR1P51861 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
CDR1P51861 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.08■■□□□ 1.13
CDR1P51861 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDR1P51861 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDR1P51861 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDR1P51861 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDR1P51861 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.08■■□□□ 1.13
CDR1P51861 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.08■■□□□ 1.13
CDR1P51861 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.08■■□□□ 1.13
CDR1P51861 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.08■■□□□ 1.13
CDR1P51861 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
CDR1P51861 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDR1P51861 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.08■■□□□ 1.12
CDR1P51861 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.08■■□□□ 1.12
CDR1P51861 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDR1P51861 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
CDR1P51861 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
CDR1P51861 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CDR1P51861 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
CDR1P51861 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDR1P51861 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.07■■□□□ 1.12
CDR1P51861 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDR1P51861 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.07■■□□□ 1.12
CDR1P51861 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms