Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.49■□□□□ 0.87
RPA3P35244 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.49■□□□□ 0.87
RPA3P35244 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPA3P35244 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPA3P35244 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPA3P35244 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPA3P35244 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.49■□□□□ 0.87
RPA3P35244 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.49■□□□□ 0.87
RPA3P35244 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.49■□□□□ 0.87
RPA3P35244 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RPA3P35244 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPA3P35244 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.49■□□□□ 0.87
RPA3P35244 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.49■□□□□ 0.87
RPA3P35244 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RPA3P35244 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
RPA3P35244 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPA3P35244 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RPA3P35244 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPA3P35244 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPA3P35244 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPA3P35244 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RPA3P35244 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPA3P35244 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPA3P35244 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RPA3P35244 AC125437.2-201ENST00000625180 2167 ntBASIC20.48■□□□□ 0.87
RPA3P35244 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPA3P35244 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.48■□□□□ 0.87
RPA3P35244 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPA3P35244 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPA3P35244 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RPA3P35244 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.48■□□□□ 0.87
RPA3P35244 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPA3P35244 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.48■□□□□ 0.87
RPA3P35244 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.48■□□□□ 0.87
RPA3P35244 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPA3P35244 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPA3P35244 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPA3P35244 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.48■□□□□ 0.87
RPA3P35244 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPA3P35244 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPA3P35244 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
RPA3P35244 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPA3P35244 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPA3P35244 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RPA3P35244 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.47■□□□□ 0.87
RPA3P35244 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPA3P35244 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RPA3P35244 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPA3P35244 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPA3P35244 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPA3P35244 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.47■□□□□ 0.87
RPA3P35244 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.47■□□□□ 0.87
RPA3P35244 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.47■□□□□ 0.87
RPA3P35244 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RPA3P35244 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPA3P35244 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
RPA3P35244 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
RPA3P35244 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPA3P35244 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPA3P35244 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.47■□□□□ 0.87
RPA3P35244 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPA3P35244 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPA3P35244 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPA3P35244 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPA3P35244 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.46■□□□□ 0.87
RPA3P35244 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPA3P35244 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPA3P35244 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPA3P35244 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPA3P35244 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.46■□□□□ 0.87
RPA3P35244 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RPA3P35244 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPA3P35244 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPA3P35244 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.46■□□□□ 0.87
RPA3P35244 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.46■□□□□ 0.87
RPA3P35244 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.46■□□□□ 0.87
RPA3P35244 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.46■□□□□ 0.87
RPA3P35244 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.46■□□□□ 0.87
RPA3P35244 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPA3P35244 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPA3P35244 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.46■□□□□ 0.87
RPA3P35244 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.46■□□□□ 0.87
RPA3P35244 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPA3P35244 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPA3P35244 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RPA3P35244 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.45■□□□□ 0.87
RPA3P35244 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
RPA3P35244 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.45■□□□□ 0.86
RPA3P35244 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.45■□□□□ 0.86
RPA3P35244 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.45■□□□□ 0.86
RPA3P35244 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.45■□□□□ 0.86
RPA3P35244 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPA3P35244 NTF6G-201ENST00000591094 616 ntBASIC20.45■□□□□ 0.86
RPA3P35244 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPA3P35244 AC053503.5-201ENST00000601508 636 ntBASIC20.45■□□□□ 0.86
RPA3P35244 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.45■□□□□ 0.86
RPA3P35244 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RPA3P35244 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.45■□□□□ 0.86
RPA3P35244 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPA3P35244 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms