Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXA6P31267 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA6P31267 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA6P31267 AP002982.1-201ENST00000492365 877 ntBASIC20.22■□□□□ 0.83
HOXA6P31267 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA6P31267 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXA6P31267 FITM1-202ENST00000559294 800 ntBASIC20.22■□□□□ 0.83
HOXA6P31267 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.22■□□□□ 0.83
HOXA6P31267 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.22■□□□□ 0.83
HOXA6P31267 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HOXA6P31267 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA6P31267 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA6P31267 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA6P31267 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXA6P31267 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HOXA6P31267 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA6P31267 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXA6P31267 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HOXA6P31267 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HOXA6P31267 AC073508.3-201ENST00000619697 1419 ntBASIC20.21■□□□□ 0.83
HOXA6P31267 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HOXA6P31267 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.21■□□□□ 0.83
HOXA6P31267 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.21■□□□□ 0.83
HOXA6P31267 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.21■□□□□ 0.83
HOXA6P31267 NAPSB-206ENST00000562112 1266 ntBASIC20.21■□□□□ 0.83
HOXA6P31267 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.21■□□□□ 0.83
HOXA6P31267 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.21■□□□□ 0.83
HOXA6P31267 AP000525.1-201ENST00000608286 694 ntBASIC20.21■□□□□ 0.83
HOXA6P31267 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXA6P31267 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXA6P31267 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HOXA6P31267 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.21■□□□□ 0.83
HOXA6P31267 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXA6P31267 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXA6P31267 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXA6P31267 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HOXA6P31267 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXA6P31267 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXA6P31267 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HOXA6P31267 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.2■□□□□ 0.82
HOXA6P31267 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.2■□□□□ 0.82
HOXA6P31267 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.2■□□□□ 0.82
HOXA6P31267 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.2■□□□□ 0.82
HOXA6P31267 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.2■□□□□ 0.82
HOXA6P31267 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.2■□□□□ 0.82
HOXA6P31267 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.2■□□□□ 0.82
HOXA6P31267 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.2■□□□□ 0.82
HOXA6P31267 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXA6P31267 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXA6P31267 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.19■□□□□ 0.82
HOXA6P31267 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXA6P31267 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXA6P31267 TERF1P1-201ENST00000311003 1181 ntBASIC20.19■□□□□ 0.82
HOXA6P31267 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.19■□□□□ 0.82
HOXA6P31267 MIR1238-201ENST00000408483 83 ntBASIC20.19■□□□□ 0.82
HOXA6P31267 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.19■□□□□ 0.82
HOXA6P31267 KSR1P1-201ENST00000446298 240 ntBASIC20.19■□□□□ 0.82
HOXA6P31267 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.19■□□□□ 0.82
HOXA6P31267 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.19■□□□□ 0.82
HOXA6P31267 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.19■□□□□ 0.82
HOXA6P31267 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.19■□□□□ 0.82
HOXA6P31267 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.18■□□□□ 0.82
HOXA6P31267 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXA6P31267 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HOXA6P31267 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.18■□□□□ 0.82
HOXA6P31267 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.18■□□□□ 0.82
HOXA6P31267 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.18■□□□□ 0.82
HOXA6P31267 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXA6P31267 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.18■□□□□ 0.82
HOXA6P31267 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA6P31267 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA6P31267 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.17■□□□□ 0.82
HOXA6P31267 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA6P31267 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA6P31267 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA6P31267 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HOXA6P31267 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.17■□□□□ 0.82
HOXA6P31267 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA6P31267 AL137013.1-201ENST00000432946 1228 ntBASIC20.17■□□□□ 0.82
HOXA6P31267 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HOXA6P31267 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
HOXA6P31267 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA6P31267 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.17■□□□□ 0.82
HOXA6P31267 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA6P31267 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA6P31267 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA6P31267 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA6P31267 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.17■□□□□ 0.82
HOXA6P31267 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.16■□□□□ 0.82
HOXA6P31267 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HOXA6P31267 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXA6P31267 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HOXA6P31267 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.16■□□□□ 0.82
HOXA6P31267 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.16■□□□□ 0.82
HOXA6P31267 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.16■□□□□ 0.82
HOXA6P31267 AC010947.1-201ENST00000623454 693 ntBASIC20.16■□□□□ 0.82
HOXA6P31267 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HOXA6P31267 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXA6P31267 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.16■□□□□ 0.82
HOXA6P31267 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms