Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LMO1P25800 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO1P25800 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LMO1P25800 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO1P25800 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO1P25800 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO1P25800 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO1P25800 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.06■□□□□ 0.32
LMO1P25800 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO1P25800 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO1P25800 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO1P25800 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.06■□□□□ 0.32
LMO1P25800 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.06■□□□□ 0.32
LMO1P25800 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.06■□□□□ 0.32
LMO1P25800 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LMO1P25800 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LMO1P25800 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
LMO1P25800 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LMO1P25800 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.06■□□□□ 0.32
LMO1P25800 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO1P25800 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LMO1P25800 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LMO1P25800 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LMO1P25800 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO1P25800 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO1P25800 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO1P25800 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
LMO1P25800 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.05■□□□□ 0.32
LMO1P25800 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.05■□□□□ 0.32
LMO1P25800 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LMO1P25800 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO1P25800 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LMO1P25800 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.05■□□□□ 0.32
LMO1P25800 AL512408.1-201ENST00000569378 2000 ntBASIC17.05■□□□□ 0.32
LMO1P25800 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO1P25800 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.05■□□□□ 0.32
LMO1P25800 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.05■□□□□ 0.32
LMO1P25800 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.05■□□□□ 0.32
LMO1P25800 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.05■□□□□ 0.32
LMO1P25800 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LMO1P25800 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.05■□□□□ 0.32
LMO1P25800 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO1P25800 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO1P25800 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO1P25800 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.05■□□□□ 0.32
LMO1P25800 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO1P25800 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO1P25800 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LMO1P25800 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.04■□□□□ 0.32
LMO1P25800 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 AC016769.1-201ENST00000409132 1010 ntBASIC17.04■□□□□ 0.32
LMO1P25800 PGM5P4-201ENST00000421970 445 ntBASIC17.04■□□□□ 0.32
LMO1P25800 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.04■□□□□ 0.32
LMO1P25800 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.04■□□□□ 0.32
LMO1P25800 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.04■□□□□ 0.32
LMO1P25800 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 MFSD11-216ENST00000590393 1141 ntBASIC17.04■□□□□ 0.32
LMO1P25800 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LMO1P25800 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.04■□□□□ 0.32
LMO1P25800 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LMO1P25800 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.04■□□□□ 0.32
LMO1P25800 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.04■□□□□ 0.32
LMO1P25800 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LMO1P25800 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO1P25800 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LMO1P25800 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LMO1P25800 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LMO1P25800 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.03■□□□□ 0.32
LMO1P25800 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LMO1P25800 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LMO1P25800 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.03■□□□□ 0.32
LMO1P25800 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LMO1P25800 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LMO1P25800 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.03■□□□□ 0.32
LMO1P25800 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LMO1P25800 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.03■□□□□ 0.32
LMO1P25800 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LMO1P25800 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.03■□□□□ 0.32
LMO1P25800 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LMO1P25800 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.03■□□□□ 0.32
LMO1P25800 DUX4L16-201ENST00000555130 1264 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms