Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
ERCC1P07992 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.96■□□□□ 0.46
ERCC1P07992 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.46
ERCC1P07992 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC1P07992 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC1P07992 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC1P07992 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC1P07992 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC1P07992 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
ERCC1P07992 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC1P07992 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.95■□□□□ 0.46
ERCC1P07992 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC1P07992 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.95■□□□□ 0.46
ERCC1P07992 GPX1P1-201ENST00000388829 606 ntBASIC17.95■□□□□ 0.46
ERCC1P07992 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ERCC1P07992 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.95■□□□□ 0.46
ERCC1P07992 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.95■□□□□ 0.46
ERCC1P07992 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.95■□□□□ 0.46
ERCC1P07992 AC005181.1-201ENST00000604782 1256 ntBASIC17.95■□□□□ 0.46
ERCC1P07992 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ERCC1P07992 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC1P07992 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.95■□□□□ 0.46
ERCC1P07992 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC1P07992 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC1P07992 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.95■□□□□ 0.46
ERCC1P07992 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC1P07992 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC1P07992 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC1P07992 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC1P07992 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC1P07992 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC1P07992 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC1P07992 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC1P07992 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ERCC1P07992 AC073314.1-201ENST00000568729 2216 ntBASIC17.94■□□□□ 0.46
ERCC1P07992 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC1P07992 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ERCC1P07992 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC1P07992 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.94■□□□□ 0.46
ERCC1P07992 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.94■□□□□ 0.46
ERCC1P07992 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.94■□□□□ 0.46
ERCC1P07992 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC1P07992 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC1P07992 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.94■□□□□ 0.46
ERCC1P07992 AL109923.1-201ENST00000618799 583 ntBASIC17.94■□□□□ 0.46
ERCC1P07992 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.94■□□□□ 0.46
ERCC1P07992 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ERCC1P07992 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ERCC1P07992 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC1P07992 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC1P07992 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC1P07992 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.94■□□□□ 0.46
ERCC1P07992 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC1P07992 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.93■□□□□ 0.46
ERCC1P07992 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 AC007225.1-201ENST00000566331 1836 ntBASIC17.93■□□□□ 0.46
ERCC1P07992 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
ERCC1P07992 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
ERCC1P07992 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.93■□□□□ 0.46
ERCC1P07992 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.93■□□□□ 0.46
ERCC1P07992 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC1P07992 AL121832.2-201ENST00000610979 668 ntBASIC17.93■□□□□ 0.46
ERCC1P07992 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.93■□□□□ 0.46
ERCC1P07992 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC1P07992 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
ERCC1P07992 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC1P07992 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.92■□□□□ 0.46
ERCC1P07992 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.92■□□□□ 0.46
ERCC1P07992 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC1P07992 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC1P07992 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC1P07992 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.92■□□□□ 0.46
ERCC1P07992 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC1P07992 SLC29A4P1-201ENST00000398760 971 ntBASIC17.92■□□□□ 0.46
ERCC1P07992 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC1P07992 NCF1B-203ENST00000435988 1254 ntBASIC17.92■□□□□ 0.46
ERCC1P07992 CROCCP5-201ENST00000436658 830 ntBASIC17.92■□□□□ 0.46
ERCC1P07992 DUX4L16-201ENST00000555130 1264 ntBASIC17.92■□□□□ 0.46
ERCC1P07992 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.92■□□□□ 0.46
ERCC1P07992 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.92■□□□□ 0.46
ERCC1P07992 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC1P07992 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC1P07992 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC1P07992 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC1P07992 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms