Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
NKX2-2O95096 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.79■□□□□ 0.6
NKX2-2O95096 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NKX2-2O95096 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
NKX2-2O95096 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-2O95096 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-2O95096 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-2O95096 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-2O95096 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NKX2-2O95096 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-2O95096 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-2O95096 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
NKX2-2O95096 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-2O95096 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
NKX2-2O95096 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-2O95096 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-2O95096 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-2O95096 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.78■□□□□ 0.6
NKX2-2O95096 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-2O95096 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-2O95096 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-2O95096 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-2O95096 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NKX2-2O95096 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-2O95096 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
NKX2-2O95096 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NKX2-2O95096 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.78■□□□□ 0.6
NKX2-2O95096 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-2O95096 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-2O95096 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-2O95096 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.78■□□□□ 0.6
NKX2-2O95096 CROCCP5-201ENST00000436658 830 ntBASIC18.78■□□□□ 0.6
NKX2-2O95096 AC105020.6-201ENST00000621523 1217 ntBASIC18.78■□□□□ 0.6
NKX2-2O95096 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-2O95096 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
NKX2-2O95096 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-2O95096 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-2O95096 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-2O95096 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-2O95096 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.77■□□□□ 0.6
NKX2-2O95096 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-2O95096 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-2O95096 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NKX2-2O95096 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NKX2-2O95096 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
NKX2-2O95096 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.77■□□□□ 0.6
NKX2-2O95096 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NKX2-2O95096 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.77■□□□□ 0.6
NKX2-2O95096 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-2O95096 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-2O95096 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.77■□□□□ 0.6
NKX2-2O95096 MIR663A-201ENST00000385250 93 ntBASIC18.77■□□□□ 0.6
NKX2-2O95096 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.77■□□□□ 0.6
NKX2-2O95096 AL355472.2-201ENST00000422958 438 ntBASIC18.77■□□□□ 0.6
NKX2-2O95096 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-2O95096 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-2O95096 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-2O95096 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.77■□□□□ 0.6
NKX2-2O95096 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
NKX2-2O95096 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.77■□□□□ 0.6
NKX2-2O95096 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.77■□□□□ 0.6
NKX2-2O95096 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-2O95096 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-2O95096 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-2O95096 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NKX2-2O95096 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
NKX2-2O95096 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.77■□□□□ 0.59
NKX2-2O95096 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
NKX2-2O95096 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-2O95096 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-2O95096 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.76■□□□□ 0.59
NKX2-2O95096 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-2O95096 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NKX2-2O95096 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.76■□□□□ 0.59
NKX2-2O95096 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-2O95096 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-2O95096 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-2O95096 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.76■□□□□ 0.59
NKX2-2O95096 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.76■□□□□ 0.59
NKX2-2O95096 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-2O95096 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-2O95096 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-2O95096 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-2O95096 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NKX2-2O95096 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-2O95096 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-2O95096 DPP3P2-201ENST00000416030 1696 ntBASIC18.76■□□□□ 0.59
NKX2-2O95096 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.75■□□□□ 0.59
NKX2-2O95096 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.75■□□□□ 0.59
NKX2-2O95096 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX2-2O95096 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NKX2-2O95096 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.75■□□□□ 0.59
NKX2-2O95096 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX2-2O95096 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NKX2-2O95096 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NKX2-2O95096 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.75■□□□□ 0.59
NKX2-2O95096 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.75■□□□□ 0.59
NKX2-2O95096 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.75■□□□□ 0.59
NKX2-2O95096 AF201337.1-201ENST00000520239 748 ntBASIC18.75■□□□□ 0.59
NKX2-2O95096 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms