Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
KDM4BO94953 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.78■□□□□ 0.44
KDM4BO94953 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
KDM4BO94953 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.78■□□□□ 0.44
KDM4BO94953 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.78■□□□□ 0.44
KDM4BO94953 AL354811.1-201ENST00000610286 706 ntBASIC17.78■□□□□ 0.44
KDM4BO94953 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.78■□□□□ 0.44
KDM4BO94953 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
KDM4BO94953 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.78■□□□□ 0.44
KDM4BO94953 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDM4BO94953 FP700111.2-201ENST00000619190 1892 ntBASIC17.78■□□□□ 0.44
KDM4BO94953 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KDM4BO94953 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
KDM4BO94953 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.77■□□□□ 0.44
KDM4BO94953 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.77■□□□□ 0.44
KDM4BO94953 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KDM4BO94953 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KDM4BO94953 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.77■□□□□ 0.44
KDM4BO94953 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
KDM4BO94953 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.77■□□□□ 0.44
KDM4BO94953 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.77■□□□□ 0.44
KDM4BO94953 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.77■□□□□ 0.44
KDM4BO94953 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KDM4BO94953 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
KDM4BO94953 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KDM4BO94953 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
KDM4BO94953 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDM4BO94953 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KDM4BO94953 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
KDM4BO94953 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDM4BO94953 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.76■□□□□ 0.43
KDM4BO94953 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDM4BO94953 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDM4BO94953 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KDM4BO94953 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
KDM4BO94953 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDM4BO94953 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KDM4BO94953 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KDM4BO94953 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDM4BO94953 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDM4BO94953 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.76■□□□□ 0.43
KDM4BO94953 AC099778.1-201ENST00000568593 1911 ntBASIC17.76■□□□□ 0.43
KDM4BO94953 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
KDM4BO94953 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDM4BO94953 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDM4BO94953 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDM4BO94953 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KDM4BO94953 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDM4BO94953 HCG11-201ENST00000411553 5696 ntBASIC17.75■□□□□ 0.43
KDM4BO94953 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDM4BO94953 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDM4BO94953 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.75■□□□□ 0.43
KDM4BO94953 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.75■□□□□ 0.43
KDM4BO94953 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.75■□□□□ 0.43
KDM4BO94953 EEF1DP3-203ENST00000566025 782 ntBASIC17.75■□□□□ 0.43
KDM4BO94953 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.75■□□□□ 0.43
KDM4BO94953 TPRG1LP1-201ENST00000598702 760 ntBASIC17.75■□□□□ 0.43
KDM4BO94953 AL358852.1-201ENST00000623174 1268 ntBASIC17.75■□□□□ 0.43
KDM4BO94953 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDM4BO94953 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.75■□□□□ 0.43
KDM4BO94953 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDM4BO94953 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDM4BO94953 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDM4BO94953 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDM4BO94953 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KDM4BO94953 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.75■□□□□ 0.43
KDM4BO94953 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.75■□□□□ 0.43
KDM4BO94953 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDM4BO94953 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
KDM4BO94953 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KDM4BO94953 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDM4BO94953 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDM4BO94953 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDM4BO94953 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KDM4BO94953 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDM4BO94953 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDM4BO94953 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.74■□□□□ 0.43
KDM4BO94953 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.74■□□□□ 0.43
KDM4BO94953 AC053503.5-201ENST00000601508 636 ntBASIC17.74■□□□□ 0.43
KDM4BO94953 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.74■□□□□ 0.43
KDM4BO94953 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KDM4BO94953 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDM4BO94953 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms