Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLN5O75503 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLN5O75503 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLN5O75503 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.49■□□□□ 0.23
CLN5O75503 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.49■□□□□ 0.23
CLN5O75503 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
CLN5O75503 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.49■□□□□ 0.23
CLN5O75503 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.49■□□□□ 0.23
CLN5O75503 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.49■□□□□ 0.23
CLN5O75503 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.49■□□□□ 0.23
CLN5O75503 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLN5O75503 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.49■□□□□ 0.23
CLN5O75503 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CLN5O75503 AC008406.3-201ENST00000620001 1374 ntBASIC16.49■□□□□ 0.23
CLN5O75503 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.49■□□□□ 0.23
CLN5O75503 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.49■□□□□ 0.23
CLN5O75503 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLN5O75503 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.48■□□□□ 0.23
CLN5O75503 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLN5O75503 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLN5O75503 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLN5O75503 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLN5O75503 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLN5O75503 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLN5O75503 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLN5O75503 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CLN5O75503 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
CLN5O75503 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CLN5O75503 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.48■□□□□ 0.23
CLN5O75503 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLN5O75503 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.48■□□□□ 0.23
CLN5O75503 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.48■□□□□ 0.23
CLN5O75503 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLN5O75503 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLN5O75503 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.48■□□□□ 0.23
CLN5O75503 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLN5O75503 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.48■□□□□ 0.23
CLN5O75503 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.48■□□□□ 0.23
CLN5O75503 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLN5O75503 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLN5O75503 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.48■□□□□ 0.23
CLN5O75503 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLN5O75503 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLN5O75503 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLN5O75503 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLN5O75503 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLN5O75503 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLN5O75503 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.47■□□□□ 0.23
CLN5O75503 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLN5O75503 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CLN5O75503 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CLN5O75503 AC009237.3-201ENST00000393279 1427 ntBASIC16.47■□□□□ 0.23
CLN5O75503 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CLN5O75503 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.47■□□□□ 0.23
CLN5O75503 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.47■□□□□ 0.23
CLN5O75503 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.47■□□□□ 0.23
CLN5O75503 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
CLN5O75503 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.47■□□□□ 0.23
CLN5O75503 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLN5O75503 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CLN5O75503 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLN5O75503 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.47■□□□□ 0.23
CLN5O75503 AC004408.2-201ENST00000623613 2777 ntBASIC16.47■□□□□ 0.23
CLN5O75503 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLN5O75503 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLN5O75503 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.47■□□□□ 0.23
CLN5O75503 AC090340.1-201ENST00000620778 4980 ntBASIC16.47■□□□□ 0.23
CLN5O75503 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLN5O75503 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLN5O75503 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLN5O75503 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLN5O75503 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLN5O75503 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLN5O75503 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLN5O75503 NEFHP1-201ENST00000412845 2629 ntBASIC16.46■□□□□ 0.23
CLN5O75503 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
CLN5O75503 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.46■□□□□ 0.23
CLN5O75503 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLN5O75503 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CLN5O75503 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
CLN5O75503 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLN5O75503 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.46■□□□□ 0.23
CLN5O75503 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CLN5O75503 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms