Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CPNE3O75131 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CPNE3O75131 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE3O75131 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.47■□□□□ 0.71
CPNE3O75131 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE3O75131 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE3O75131 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE3O75131 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE3O75131 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE3O75131 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.47■□□□□ 0.71
CPNE3O75131 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CPNE3O75131 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE3O75131 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CPNE3O75131 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CPNE3O75131 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE3O75131 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CPNE3O75131 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE3O75131 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE3O75131 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE3O75131 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE3O75131 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE3O75131 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE3O75131 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE3O75131 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.46■□□□□ 0.71
CPNE3O75131 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.46■□□□□ 0.71
CPNE3O75131 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE3O75131 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE3O75131 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.46■□□□□ 0.71
CPNE3O75131 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
CPNE3O75131 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.46■□□□□ 0.71
CPNE3O75131 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE3O75131 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE3O75131 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE3O75131 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.46■□□□□ 0.71
CPNE3O75131 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE3O75131 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.46■□□□□ 0.71
CPNE3O75131 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE3O75131 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE3O75131 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE3O75131 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.45■□□□□ 0.7
CPNE3O75131 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE3O75131 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CPNE3O75131 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE3O75131 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE3O75131 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.45■□□□□ 0.7
CPNE3O75131 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE3O75131 PGM5P4-201ENST00000421970 445 ntBASIC19.45■□□□□ 0.7
CPNE3O75131 AC128676.1-201ENST00000454392 318 ntBASIC19.45■□□□□ 0.7
CPNE3O75131 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.45■□□□□ 0.7
CPNE3O75131 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.45■□□□□ 0.7
CPNE3O75131 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE3O75131 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE3O75131 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.45■□□□□ 0.7
CPNE3O75131 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE3O75131 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE3O75131 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 AC087633.2-202ENST00000565166 1439 ntBASIC19.44■□□□□ 0.7
CPNE3O75131 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CPNE3O75131 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CPNE3O75131 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CPNE3O75131 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CPNE3O75131 PNMA6B-201ENST00000538162 1200 ntBASIC19.44■□□□□ 0.7
CPNE3O75131 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.44■□□□□ 0.7
CPNE3O75131 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.44■□□□□ 0.7
CPNE3O75131 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.44■□□□□ 0.7
CPNE3O75131 AC092368.3-202ENST00000574180 1591 ntBASIC19.44■□□□□ 0.7
CPNE3O75131 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.44■□□□□ 0.7
CPNE3O75131 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE3O75131 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CPNE3O75131 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.43■□□□□ 0.7
CPNE3O75131 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CPNE3O75131 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE3O75131 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.43■□□□□ 0.7
CPNE3O75131 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE3O75131 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE3O75131 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE3O75131 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE3O75131 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.43■□□□□ 0.7
CPNE3O75131 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE3O75131 AC098590.1-201ENST00000468126 897 ntBASIC19.43■□□□□ 0.7
CPNE3O75131 AC093827.2-201ENST00000512654 315 ntBASIC19.43■□□□□ 0.7
CPNE3O75131 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE3O75131 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE3O75131 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CPNE3O75131 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms