Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CTNND1O60716 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
CTNND1O60716 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CTNND1O60716 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CTNND1O60716 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.86■■□□□ 1.41
CTNND1O60716 RARRES2P10-201ENST00000564312 460 ntBASIC23.86■■□□□ 1.41
CTNND1O60716 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CTNND1O60716 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CTNND1O60716 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CTNND1O60716 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTNND1O60716 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTNND1O60716 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTNND1O60716 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTNND1O60716 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTNND1O60716 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTNND1O60716 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.85■■□□□ 1.41
CTNND1O60716 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.85■■□□□ 1.41
CTNND1O60716 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CTNND1O60716 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CTNND1O60716 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.85■■□□□ 1.41
CTNND1O60716 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.85■■□□□ 1.41
CTNND1O60716 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CTNND1O60716 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.85■■□□□ 1.41
CTNND1O60716 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTNND1O60716 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTNND1O60716 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CTNND1O60716 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTNND1O60716 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTNND1O60716 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CTNND1O60716 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.84■■□□□ 1.41
CTNND1O60716 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CTNND1O60716 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CTNND1O60716 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.84■■□□□ 1.41
CTNND1O60716 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.84■■□□□ 1.41
CTNND1O60716 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.84■■□□□ 1.41
CTNND1O60716 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.84■■□□□ 1.41
CTNND1O60716 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.84■■□□□ 1.41
CTNND1O60716 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.84■■□□□ 1.41
CTNND1O60716 LINC01023-201ENST00000606054 436 ntBASIC23.84■■□□□ 1.41
CTNND1O60716 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.84■■□□□ 1.41
CTNND1O60716 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CTNND1O60716 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CTNND1O60716 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CTNND1O60716 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CTNND1O60716 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CTNND1O60716 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CTNND1O60716 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CTNND1O60716 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
CTNND1O60716 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.83■■□□□ 1.41
CTNND1O60716 AC113410.3-201ENST00000623366 203 ntBASIC23.83■■□□□ 1.41
CTNND1O60716 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CTNND1O60716 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CTNND1O60716 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CTNND1O60716 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CTNND1O60716 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.82■■□□□ 1.4
CTNND1O60716 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CTNND1O60716 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTNND1O60716 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
CTNND1O60716 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTNND1O60716 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.82■■□□□ 1.4
CTNND1O60716 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.82■■□□□ 1.4
CTNND1O60716 PRKY-204ENST00000533551 1019 ntBASIC23.82■■□□□ 1.4
CTNND1O60716 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC23.82■■□□□ 1.4
CTNND1O60716 MIR4785-201ENST00000585005 73 ntBASIC23.82■■□□□ 1.4
CTNND1O60716 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CTNND1O60716 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.82■■□□□ 1.4
CTNND1O60716 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.82■■□□□ 1.4
CTNND1O60716 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.82■■□□□ 1.4
CTNND1O60716 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTNND1O60716 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTNND1O60716 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.82■■□□□ 1.4
CTNND1O60716 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTNND1O60716 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.82■■□□□ 1.4
CTNND1O60716 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CTNND1O60716 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.81■■□□□ 1.4
CTNND1O60716 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTNND1O60716 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTNND1O60716 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTNND1O60716 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTNND1O60716 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTNND1O60716 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTNND1O60716 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTNND1O60716 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CTNND1O60716 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CTNND1O60716 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.81■■□□□ 1.4
CTNND1O60716 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.81■■□□□ 1.4
CTNND1O60716 FAM210CP-201ENST00000445714 574 ntBASIC23.81■■□□□ 1.4
CTNND1O60716 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.81■■□□□ 1.4
CTNND1O60716 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.81■■□□□ 1.4
CTNND1O60716 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTNND1O60716 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTNND1O60716 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CTNND1O60716 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CTNND1O60716 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTNND1O60716 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CTNND1O60716 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CTNND1O60716 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.8■■□□□ 1.4
CTNND1O60716 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTNND1O60716 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTNND1O60716 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms