Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IDH3BO43837 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IDH3BO43837 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IDH3BO43837 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IDH3BO43837 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
IDH3BO43837 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IDH3BO43837 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.56■□□□□ 0.56
IDH3BO43837 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.56■□□□□ 0.56
IDH3BO43837 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.56■□□□□ 0.56
IDH3BO43837 AFG3L1P-217ENST00000557444 2447 ntBASIC18.56■□□□□ 0.56
IDH3BO43837 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
IDH3BO43837 AC020907.5-201ENST00000624372 1936 ntBASIC18.56■□□□□ 0.56
IDH3BO43837 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IDH3BO43837 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
IDH3BO43837 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.56■□□□□ 0.56
IDH3BO43837 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.56■□□□□ 0.56
IDH3BO43837 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IDH3BO43837 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IDH3BO43837 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
IDH3BO43837 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IDH3BO43837 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.55■□□□□ 0.56
IDH3BO43837 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
IDH3BO43837 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IDH3BO43837 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
IDH3BO43837 KRT87P-202ENST00000534226 1464 ntBASIC18.55■□□□□ 0.56
IDH3BO43837 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
IDH3BO43837 AC079140.4-201ENST00000507448 529 ntBASIC18.55■□□□□ 0.56
IDH3BO43837 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IDH3BO43837 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.55■□□□□ 0.56
IDH3BO43837 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
IDH3BO43837 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.55■□□□□ 0.56
IDH3BO43837 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IDH3BO43837 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.55■□□□□ 0.56
IDH3BO43837 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
IDH3BO43837 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.54■□□□□ 0.56
IDH3BO43837 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.54■□□□□ 0.56
IDH3BO43837 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.54■□□□□ 0.56
IDH3BO43837 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 AL139246.5-201ENST00000606645 996 ntBASIC18.54■□□□□ 0.56
IDH3BO43837 AC027702.1-201ENST00000563810 1770 ntBASIC18.54■□□□□ 0.56
IDH3BO43837 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
IDH3BO43837 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
IDH3BO43837 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.54■□□□□ 0.56
IDH3BO43837 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
IDH3BO43837 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IDH3BO43837 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
IDH3BO43837 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.53■□□□□ 0.56
IDH3BO43837 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
IDH3BO43837 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
IDH3BO43837 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.53■□□□□ 0.56
IDH3BO43837 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.53■□□□□ 0.56
IDH3BO43837 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.53■□□□□ 0.56
IDH3BO43837 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
IDH3BO43837 AC138907.5-202ENST00000569484 235 ntBASIC18.53■□□□□ 0.56
IDH3BO43837 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.53■□□□□ 0.56
IDH3BO43837 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.53■□□□□ 0.56
IDH3BO43837 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.53■□□□□ 0.56
IDH3BO43837 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
IDH3BO43837 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
IDH3BO43837 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
IDH3BO43837 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IDH3BO43837 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IDH3BO43837 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
IDH3BO43837 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IDH3BO43837 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
IDH3BO43837 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
IDH3BO43837 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IDH3BO43837 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
IDH3BO43837 KRT16P2-201ENST00000414673 1423 ntBASIC18.52■□□□□ 0.56
IDH3BO43837 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms