Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHF1O43189 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PHF1O43189 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHF1O43189 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHF1O43189 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PHF1O43189 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHF1O43189 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHF1O43189 DUSP5P2-201ENST00000426873 1033 ntBASIC17.48■□□□□ 0.39
PHF1O43189 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.48■□□□□ 0.39
PHF1O43189 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.48■□□□□ 0.39
PHF1O43189 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.48■□□□□ 0.39
PHF1O43189 MIR4758-201ENST00000577688 71 ntBASIC17.48■□□□□ 0.39
PHF1O43189 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PHF1O43189 AC120498.10-201ENST00000621827 505 ntBASIC17.48■□□□□ 0.39
PHF1O43189 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHF1O43189 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PHF1O43189 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHF1O43189 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.48■□□□□ 0.39
PHF1O43189 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PHF1O43189 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHF1O43189 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHF1O43189 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PHF1O43189 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PHF1O43189 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
PHF1O43189 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PHF1O43189 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHF1O43189 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PHF1O43189 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHF1O43189 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PHF1O43189 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.47■□□□□ 0.39
PHF1O43189 AC098590.1-201ENST00000468126 897 ntBASIC17.47■□□□□ 0.39
PHF1O43189 AC133552.2-202ENST00000575694 574 ntBASIC17.47■□□□□ 0.39
PHF1O43189 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.47■□□□□ 0.39
PHF1O43189 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.47■□□□□ 0.39
PHF1O43189 AC010536.3-201ENST00000620306 533 ntBASIC17.47■□□□□ 0.39
PHF1O43189 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PHF1O43189 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.47■□□□□ 0.39
PHF1O43189 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PHF1O43189 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.47■□□□□ 0.39
PHF1O43189 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHF1O43189 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PHF1O43189 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHF1O43189 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.47■□□□□ 0.39
PHF1O43189 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PHF1O43189 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHF1O43189 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHF1O43189 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.46■□□□□ 0.39
PHF1O43189 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
PHF1O43189 AC061975.6-201ENST00000579045 1553 ntBASIC17.46■□□□□ 0.39
PHF1O43189 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHF1O43189 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHF1O43189 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PHF1O43189 AL596275.1-201ENST00000423464 877 ntBASIC17.46■□□□□ 0.39
PHF1O43189 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.46■□□□□ 0.39
PHF1O43189 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PHF1O43189 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.46■□□□□ 0.39
PHF1O43189 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PHF1O43189 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHF1O43189 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.46■□□□□ 0.39
PHF1O43189 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHF1O43189 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PHF1O43189 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PHF1O43189 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PHF1O43189 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PHF1O43189 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.45■□□□□ 0.38
PHF1O43189 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PHF1O43189 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.45■□□□□ 0.38
PHF1O43189 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 POU5F1P4-201ENST00000413175 1085 ntBASIC17.45■□□□□ 0.38
PHF1O43189 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.45■□□□□ 0.38
PHF1O43189 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF1O43189 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.44■□□□□ 0.38
PHF1O43189 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF1O43189 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF1O43189 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF1O43189 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHF1O43189 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF1O43189 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.44■□□□□ 0.38
PHF1O43189 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF1O43189 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF1O43189 GCSHP5-201ENST00000443090 522 ntBASIC17.44■□□□□ 0.38
PHF1O43189 RPS2P4-201ENST00000476944 856 ntBASIC17.44■□□□□ 0.38
PHF1O43189 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.44■□□□□ 0.38
PHF1O43189 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms