Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV5-4A0A0C4DH59 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV5-4A0A0C4DH59 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.07■□□□□ 0.8
TRBV5-4A0A0C4DH59 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 SLC29A4P1-201ENST00000398760 971 ntBASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 LSM12P1-201ENST00000411836 588 ntBASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 AL512408.1-201ENST00000569378 2000 ntBASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 AC092118.2-201ENST00000613495 667 ntBASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV5-4A0A0C4DH59 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV5-4A0A0C4DH59 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV5-4A0A0C4DH59 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.05■□□□□ 0.8
TRBV5-4A0A0C4DH59 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
TRBV5-4A0A0C4DH59 AC104771.1-201ENST00000603335 964 ntBASIC20.05■□□□□ 0.8
TRBV5-4A0A0C4DH59 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV5-4A0A0C4DH59 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRBV5-4A0A0C4DH59 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.05■□□□□ 0.8
TRBV5-4A0A0C4DH59 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV5-4A0A0C4DH59 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRBV5-4A0A0C4DH59 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 C2orf69P4-201ENST00000565394 541 ntBASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 AL109923.1-201ENST00000618799 583 ntBASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV5-4A0A0C4DH59 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 PTBP1P-201ENST00000554374 1601 ntBASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 DPP3P2-201ENST00000416030 1696 ntBASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBV5-4A0A0C4DH59 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 AC142086.2-201ENST00000569753 217 ntBASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRBV5-4A0A0C4DH59 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms