Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV12-3A0A0B4J271 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV12-3A0A0B4J271 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 AL121603.2-201ENST00000557373 2117 ntBASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV12-3A0A0B4J271 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 AC092720.2-201ENST00000602388 1665 ntBASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 KRT19P1-201ENST00000405746 1186 ntBASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-3A0A0B4J271 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-3A0A0B4J271 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms