Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 IRS3P-201ENST00000223076 1006 ntBASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-4A0A0B4J246 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRAV8-4A0A0B4J246 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms