Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC8.78□□□□□ -1
SLC1A1P43005 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC8.78□□□□□ -1
SLC1A1P43005 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
SLC1A1P43005 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SLC1A1P43005 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
SLC1A1P43005 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC8.78□□□□□ -1
SLC1A1P43005 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SLC1A1P43005 PTPN20-205ENST00000395721 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SLC1A1P43005 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
SLC1A1P43005 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
SLC1A1P43005 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.77□□□□□ -1
SLC1A1P43005 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
SLC1A1P43005 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
SLC1A1P43005 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.77□□□□□ -1
SLC1A1P43005 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC8.77□□□□□ -1.01
SLC1A1P43005 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
SLC1A1P43005 AC073072.1-201ENST00000325042 1364 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC8.77□□□□□ -1.01
SLC1A1P43005 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
SLC1A1P43005 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 COX17P1-201ENST00000378775 192 ntBASIC8.77□□□□□ -1.01
SLC1A1P43005 ELF5-203ENST00000429939 637 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 AC018641.1-201ENST00000435950 796 ntBASIC8.77□□□□□ -1.01
SLC1A1P43005 LINC02093-201ENST00000440522 485 ntTSL 5 BASIC8.77□□□□□ -1.01
SLC1A1P43005 MDC1-AS1-201ENST00000442150 738 ntTSL 3 BASIC8.77□□□□□ -1.01
SLC1A1P43005 TRBV21-1-201ENST00000453262 348 ntBASIC8.77□□□□□ -1.01
SLC1A1P43005 RN7SL63P-201ENST00000468228 304 ntBASIC8.77□□□□□ -1.01
SLC1A1P43005 AC110994.1-201ENST00000468519 406 ntBASIC8.77□□□□□ -1.01
SLC1A1P43005 RPL23AP10-201ENST00000489946 466 ntBASIC8.77□□□□□ -1.01
SLC1A1P43005 AP003532.1-201ENST00000529936 310 ntBASIC8.77□□□□□ -1.01
SLC1A1P43005 AP002892.2-201ENST00000544195 560 ntTSL 4 BASIC8.77□□□□□ -1.01
SLC1A1P43005 OR4C45-201ENST00000568934 921 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
SLC1A1P43005 AC090358.1-201ENST00000579862 852 ntTSL 3 BASIC8.77□□□□□ -1.01
SLC1A1P43005 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC8.77□□□□□ -1.01
SLC1A1P43005 ZNF559-ZNF177-205ENST00000602856 419 ntTSL 5 BASIC8.77□□□□□ -1.01
SLC1A1P43005 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC8.77□□□□□ -1.01
SLC1A1P43005 AL109804.1-201ENST00000620777 562 ntTSL 5 BASIC8.77□□□□□ -1.01
SLC1A1P43005 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC8.77□□□□□ -1.01
SLC1A1P43005 OR5AR1-201ENST00000624596 1026 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
SLC1A1P43005 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC8.77□□□□□ -1.01
SLC1A1P43005 AC110926.1-201ENST00000412499 2825 ntBASIC8.77□□□□□ -1.01
SLC1A1P43005 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC8.77□□□□□ -1.01
SLC1A1P43005 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
SLC1A1P43005 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 AC018880.1-201ENST00000418898 1319 ntBASIC8.77□□□□□ -1.01
SLC1A1P43005 LINC00663-203ENST00000586885 2546 ntBASIC8.77□□□□□ -1.01
SLC1A1P43005 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 RBMS3-203ENST00000383767 1864 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SLC1A1P43005 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.77□□□□□ -1.01
SLC1A1P43005 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC8.77□□□□□ -1.01
SLC1A1P43005 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SLC1A1P43005 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
SLC1A1P43005 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC8.76□□□□□ -1.01
SLC1A1P43005 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
SLC1A1P43005 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC8.76□□□□□ -1.01
SLC1A1P43005 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SLC1A1P43005 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SLC1A1P43005 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
SLC1A1P43005 AC025580.2-204ENST00000560077 2399 ntTSL 5 BASIC8.76□□□□□ -1.01
SLC1A1P43005 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC8.76□□□□□ -1.01
SLC1A1P43005 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SLC1A1P43005 RPL32-201ENST00000273223 567 ntTSL 3 BASIC8.76□□□□□ -1.01
SLC1A1P43005 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC8.76□□□□□ -1.01
SLC1A1P43005 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SLC1A1P43005 CYCSP5-201ENST00000415043 297 ntBASIC8.76□□□□□ -1.01
SLC1A1P43005 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC8.76□□□□□ -1.01
SLC1A1P43005 BLNK-204ENST00000427367 1284 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SLC1A1P43005 AC007349.2-201ENST00000439998 553 ntTSL 2 BASIC8.76□□□□□ -1.01
SLC1A1P43005 IFNWP5-201ENST00000445100 588 ntBASIC8.76□□□□□ -1.01
SLC1A1P43005 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC8.76□□□□□ -1.01
SLC1A1P43005 AC104843.1-201ENST00000451203 319 ntBASIC8.76□□□□□ -1.01
SLC1A1P43005 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
SLC1A1P43005 PHBP9-201ENST00000453578 825 ntBASIC8.76□□□□□ -1.01
SLC1A1P43005 DAP3P2-201ENST00000458547 510 ntBASIC8.76□□□□□ -1.01
SLC1A1P43005 RN7SL573P-201ENST00000485340 276 ntBASIC8.76□□□□□ -1.01
SLC1A1P43005 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC8.76□□□□□ -1.01
SLC1A1P43005 AC006927.1-201ENST00000544818 498 ntBASIC8.76□□□□□ -1.01
SLC1A1P43005 AC078865.1-201ENST00000547174 562 ntTSL 4 BASIC8.76□□□□□ -1.01
SLC1A1P43005 AL392023.2-201ENST00000554687 785 ntTSL 4 BASIC8.76□□□□□ -1.01
SLC1A1P43005 LINC02321-201ENST00000555975 384 ntTSL 3 BASIC8.76□□□□□ -1.01
SLC1A1P43005 AC090607.2-201ENST00000560331 695 ntBASIC8.76□□□□□ -1.01
SLC1A1P43005 RN7SL246P-201ENST00000584467 296 ntBASIC8.76□□□□□ -1.01
SLC1A1P43005 AC005954.1-201ENST00000591962 337 ntTSL 3 BASIC8.76□□□□□ -1.01
SLC1A1P43005 AC011523.1-201ENST00000598079 392 ntTSL 3 BASIC8.76□□□□□ -1.01
SLC1A1P43005 AC093458.1-201ENST00000608912 222 ntBASIC8.76□□□□□ -1.01
SLC1A1P43005 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms