RNA–Protein interactions for RNA: ENST00000591962.1

AC005954.1-201, humanhuman

TSL 3 BASIC

Gene AC005954.1, Length 337 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005954.1-201ENST00000591962 AEBP2Q6ZN18 517 aaPredicted RBP38.45■■■■□ 3.75
AC005954.1-201ENST00000591962 CHIC1Q5VXU3 224 aa36.41■■■■□ 3.42
AC005954.1-201ENST00000591962 SENP3Q9H4L4 574 aaPredicted RBP32.87■■■□□ 2.85
AC005954.1-201ENST00000591962 PHF23Q9BUL5 403 aaPredicted RBP32.41■■■□□ 2.78
AC005954.1-201ENST00000591962 FOXD1Q16676 465 aa30.62■■■□□ 2.49
AC005954.1-201ENST00000591962 PLPPR3Q6T4P5 718 aa29.04■■■□□ 2.24
AC005954.1-201ENST00000591962 MSH5O43196 834 aa28.76■■■□□ 2.19
AC005954.1-201ENST00000591962 PIAS4Q8N2W9 510 aaPredicted RBP28.57■■■□□ 2.16
AC005954.1-201ENST00000591962 PPP6R1Q9UPN7 881 aa28.51■■■□□ 2.15
AC005954.1-201ENST00000591962 ADRA2BP18089 450 aa28.4■■■□□ 2.14
AC005954.1-201ENST00000591962 POTEDQ86YR6 584 aa28.28■■■□□ 2.12
AC005954.1-201ENST00000591962 MAPK8IP2Q13387 824 aaPredicted RBP26.12■■□□□ 1.77
AC005954.1-201ENST00000591962 SCAF1Q9H7N4 1312 aaKnown RBP26.06■■□□□ 1.76
AC005954.1-201ENST00000591962 DMRT2Q9Y5R5 561 aa26.03■■□□□ 1.76
AC005954.1-201ENST00000591962 PPP4R3CPQ6ZMV5 832 aa25.41■■□□□ 1.66
AC005954.1-201ENST00000591962 HOXD11P31277 338 aaPredicted RBP25.04■■□□□ 1.6
AC005954.1-201ENST00000591962 CNKSR2Q8WXI2 1034 aa24.99■■□□□ 1.59
AC005954.1-201ENST00000591962 DCAF8L1A6NGE4 600 aa24.91■■□□□ 1.58
AC005954.1-201ENST00000591962 RNF216Q9NWF9 866 aaPredicted RBP24.81■■□□□ 1.56
AC005954.1-201ENST00000591962 CACNB1Q02641 598 aaPredicted RBP24.74■■□□□ 1.55
AC005954.1-201ENST00000591962 RNF39Q9H2S5 420 aa24.52■■□□□ 1.52
AC005954.1-201ENST00000591962 NCBP3Q53F19 620 aaKnown RBP24.42■■□□□ 1.5
AC005954.1-201ENST00000591962 DNAJC5BQ9UF47 199 aa24.28■■□□□ 1.48
AC005954.1-201ENST00000591962 C1QBPQ07021 282 aaKnown RBP24.17■■□□□ 1.46
AC005954.1-201ENST00000591962 NPM3O75607 178 aaKnown RBP24.02■■□□□ 1.44
AC005954.1-201ENST00000591962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.82■■□□□ 1.4
AC005954.1-201ENST00000591962 KCNA4P22459 653 aa23.41■■□□□ 1.34
AC005954.1-201ENST00000591962 U3KPZ7 1027 aaPredicted RBP23.29■■□□□ 1.32
AC005954.1-201ENST00000591962 SLC4A2P04920 1241 aa22.99■■□□□ 1.27
AC005954.1-201ENST00000591962 SPINK5Q9NQ38 1064 aaPredicted RBP22.99■■□□□ 1.27
AC005954.1-201ENST00000591962 CAPN15O75808 1086 aa22.96■■□□□ 1.27
AC005954.1-201ENST00000591962 DSG3P32926 999 aa22.9■■□□□ 1.26
AC005954.1-201ENST00000591962 APLP2Q06481 763 aa22.69■■□□□ 1.22
AC005954.1-201ENST00000591962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.64■■□□□ 1.21
AC005954.1-201ENST00000591962 HNRNPUL2Q1KMD3 747 aaKnown RBP22.64■■□□□ 1.21
AC005954.1-201ENST00000591962 ZNF219Q9P2Y4 722 aaPredicted RBP22.56■■□□□ 1.2
AC005954.1-201ENST00000591962 TRHP20396 242 aaPredicted RBP22.55■■□□□ 1.2
AC005954.1-201ENST00000591962 SAMD1Q6SPF0 538 aaPredicted RBP22.49■■□□□ 1.19
AC005954.1-201ENST00000591962 ABCB7O75027 752 aa22.38■■□□□ 1.17
AC005954.1-201ENST00000591962 MYCNP04198 464 aaPredicted RBP22.24■■□□□ 1.15
AC005954.1-201ENST00000591962 POTEHQ6S545 545 aa22.15■■□□□ 1.14
AC005954.1-201ENST00000591962 SLC4A1APQ9BWU0 796 aaKnown RBP22.08■■□□□ 1.13
AC005954.1-201ENST00000591962 POLA2Q14181 598 aa21.93■■□□□ 1.1
AC005954.1-201ENST00000591962 FOXD4L1Q9NU39 408 aa21.93■■□□□ 1.1
AC005954.1-201ENST00000591962 RBM42Q9BTD8 480 aaKnown RBP21.88■■□□□ 1.09
AC005954.1-201ENST00000591962 ATF5Q9Y2D1 282 aaPredicted RBP21.69■■□□□ 1.06
AC005954.1-201ENST00000591962 ZBTB12Q9Y330 459 aaPredicted RBP21.52■■□□□ 1.04
AC005954.1-201ENST00000591962 ZBTB22O15209 634 aa21.5■■□□□ 1.03
AC005954.1-201ENST00000591962 CHRDL2Q6WN34 429 aa21.43■■□□□ 1.02
AC005954.1-201ENST00000591962 AKT1S1Q96B36 256 aa21.35■■□□□ 1.01
AC005954.1-201ENST00000591962 ATXN8OSP0DMR3 200 aa21.32■■□□□ 1
AC005954.1-201ENST00000591962 OSCARQ8IYS5 282 aa21.21■□□□□ 0.99
AC005954.1-201ENST00000591962 REM2Q8IYK8 340 aaPredicted RBP21.11■□□□□ 0.97
AC005954.1-201ENST00000591962 FBLN2P98095 1184 aa20.9■□□□□ 0.94
AC005954.1-201ENST00000591962 PITPNM1O00562 1244 aa20.87■□□□□ 0.93
AC005954.1-201ENST00000591962 PIP4P2Q8N4L2 257 aa20.87■□□□□ 0.93
AC005954.1-201ENST00000591962 SPDYE2BA6NHP3 402 aa20.84■□□□□ 0.93
AC005954.1-201ENST00000591962 SPDYE6P0CI01 402 aa20.84■□□□□ 0.93
AC005954.1-201ENST00000591962 SPDYE2Q495Y8 402 aa20.84■□□□□ 0.93
AC005954.1-201ENST00000591962 FXR2P51116 673 aaKnown RBP eCLIP20.76■□□□□ 0.91
AC005954.1-201ENST00000591962 MKRN4PQ13434 485 aaPredicted RBP20.71■□□□□ 0.91
AC005954.1-201ENST00000591962 SP7Q8TDD2 431 aaPredicted RBP20.69■□□□□ 0.9
AC005954.1-201ENST00000591962 HAX1O00165 279 aa20.54■□□□□ 0.88
AC005954.1-201ENST00000591962 ZNF692Q9BU19 519 aaPredicted RBP20.54■□□□□ 0.88
AC005954.1-201ENST00000591962 SSUH2Q9Y2M2 353 aa20.54■□□□□ 0.88
AC005954.1-201ENST00000591962 SPDYE1Q8NFV5 336 aaPredicted RBP20.5■□□□□ 0.87
AC005954.1-201ENST00000591962 CLEC11AQ9Y240 323 aa20.43■□□□□ 0.86
AC005954.1-201ENST00000591962 CSRNP3Q8WYN3 585 aa20.4■□□□□ 0.86
AC005954.1-201ENST00000591962 PRKAR2AP13861 404 aaKnown RBP20.33■□□□□ 0.85
AC005954.1-201ENST00000591962 EVX2Q03828 476 aa20.26■□□□□ 0.83
AC005954.1-201ENST00000591962 PABPN1Q86U42 306 aaKnown RBP eCLIP20.22■□□□□ 0.83
AC005954.1-201ENST00000591962 PRR29P0C7W0 189 aa20.11■□□□□ 0.81
AC005954.1-201ENST00000591962 C19orf67A6NJJ6 358 aa20.1■□□□□ 0.81
AC005954.1-201ENST00000591962 CHADLQ6NUI6 762 aa20.04■□□□□ 0.8
AC005954.1-201ENST00000591962 EHMT2Q96KQ7 1210 aa19.99■□□□□ 0.79
AC005954.1-201ENST00000591962 GABBR2O75899 941 aa19.82■□□□□ 0.76
AC005954.1-201ENST00000591962 FARP1Q9Y4F1 1045 aaPredicted RBP19.78■□□□□ 0.76
AC005954.1-201ENST00000591962 STAG3Q9UJ98 1225 aa19.69■□□□□ 0.74
AC005954.1-201ENST00000591962 CD44P16070 742 aaKnown RBP19.68■□□□□ 0.74
AC005954.1-201ENST00000591962 SPDYE4A6NLX3 237 aa19.66■□□□□ 0.74
AC005954.1-201ENST00000591962 CLCN6P51797 869 aa19.56■□□□□ 0.72
AC005954.1-201ENST00000591962 CREBZFQ9NS37 354 aa19.56■□□□□ 0.72
AC005954.1-201ENST00000591962 LHX8Q68G74 356 aa19.41■□□□□ 0.7
AC005954.1-201ENST00000591962 ZNF579Q8NAF0 562 aaKnown RBP19.4■□□□□ 0.7
AC005954.1-201ENST00000591962 POTEIP0CG38 1075 aa19.39■□□□□ 0.69
AC005954.1-201ENST00000591962 ZRANB1Q9UGI0 708 aa19.38■□□□□ 0.69
AC005954.1-201ENST00000591962 DCBLD2Q96PD2 775 aa19.25■□□□□ 0.67
AC005954.1-201ENST00000591962 NPM1P06748 294 aaKnown RBP eCLIP19.23■□□□□ 0.67
AC005954.1-201ENST00000591962 MNX1P50219 401 aaPredicted RBP19.22■□□□□ 0.67
AC005954.1-201ENST00000591962 PAK3O75914 559 aaPredicted RBP19.21■□□□□ 0.67
AC005954.1-201ENST00000591962 PROM2Q8N271 834 aa19.21■□□□□ 0.67
AC005954.1-201ENST00000591962 GALR2O43603 387 aaPredicted RBP19.13■□□□□ 0.65
AC005954.1-201ENST00000591962 PHF12Q96QT6 1004 aa19.07■□□□□ 0.64
AC005954.1-201ENST00000591962 MS4A3Q96HJ5 214 aa18.83■□□□□ 0.6
AC005954.1-201ENST00000591962 TSPYL2Q9H2G4 693 aaPredicted RBP18.82■□□□□ 0.6
AC005954.1-201ENST00000591962 PLEKHG5O94827 1062 aa18.8■□□□□ 0.6
AC005954.1-201ENST00000591962 NISCHQ9Y2I1 1504 aa18.79■□□□□ 0.6
AC005954.1-201ENST00000591962 ASTLQ6HA08 431 aaPredicted RBP18.78■□□□□ 0.6
AC005954.1-201ENST00000591962 PELP1Q8IZL8 1130 aaKnown RBP18.78■□□□□ 0.6
AC005954.1-201ENST00000591962 MIER1Q8N108 512 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms