RNA–Protein interactions for RNA: ENST00000453262.2

TRBV21-1-201, Transcript of T cell receptor beta variable 21-1 (pseudogene), humanhuman

BASIC

Gene TRBV21-1, Length 348 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV21-1-201ENST00000453262 AEBP2Q6ZN18 517 aaPredicted RBP25.99■■□□□ 1.75
TRBV21-1-201ENST00000453262 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
TRBV21-1-201ENST00000453262 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
TRBV21-1-201ENST00000453262 PHF23Q9BUL5 403 aaPredicted RBP21.87■■□□□ 1.09
TRBV21-1-201ENST00000453262 FOXD1Q16676 465 aa20.69■□□□□ 0.9
TRBV21-1-201ENST00000453262 NISCHQ9Y2I1 1504 aa19.69■□□□□ 0.74
TRBV21-1-201ENST00000453262 PLPPR3Q6T4P5 718 aa19.5■□□□□ 0.71
TRBV21-1-201ENST00000453262 MSH5O43196 834 aa19.38■□□□□ 0.69
TRBV21-1-201ENST00000453262 PIAS4Q8N2W9 510 aaPredicted RBP19.29■□□□□ 0.68
TRBV21-1-201ENST00000453262 PPP6R1Q9UPN7 881 aa19.26■□□□□ 0.67
TRBV21-1-201ENST00000453262 POTEDQ86YR6 584 aa19.2■□□□□ 0.66
TRBV21-1-201ENST00000453262 ADRA2BP18089 450 aa19.19■□□□□ 0.66
TRBV21-1-201ENST00000453262 MAPK8IP2Q13387 824 aaPredicted RBP17.69■□□□□ 0.42
TRBV21-1-201ENST00000453262 DMRT2Q9Y5R5 561 aa17.55■□□□□ 0.4
TRBV21-1-201ENST00000453262 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
TRBV21-1-201ENST00000453262 CCDC180Q9P1Z9 1646 aa17.4■□□□□ 0.38
TRBV21-1-201ENST00000453262 PPP4R3CPQ6ZMV5 832 aa17.09■□□□□ 0.33
TRBV21-1-201ENST00000453262 DCAF8L1A6NGE4 600 aa16.87■□□□□ 0.29
TRBV21-1-201ENST00000453262 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
TRBV21-1-201ENST00000453262 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
TRBV21-1-201ENST00000453262 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
TRBV21-1-201ENST00000453262 ABCC9O60706 1549 aa16.68■□□□□ 0.26
TRBV21-1-201ENST00000453262 RNF216Q9NWF9 866 aaPredicted RBP16.67■□□□□ 0.26
TRBV21-1-201ENST00000453262 RNF39Q9H2S5 420 aa16.54■□□□□ 0.24
TRBV21-1-201ENST00000453262 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
TRBV21-1-201ENST00000453262 DCAF8L2P0C7V8 631 aa16.39■□□□□ 0.21
TRBV21-1-201ENST00000453262 NCBP3Q53F19 620 aaKnown RBP16.37■□□□□ 0.21
TRBV21-1-201ENST00000453262 C1QBPQ07021 282 aaKnown RBP16.27■□□□□ 0.2
TRBV21-1-201ENST00000453262 DCAF1Q9Y4B6 1507 aa16.24■□□□□ 0.19
TRBV21-1-201ENST00000453262 DNAJC5BQ9UF47 199 aa16.24■□□□□ 0.19
TRBV21-1-201ENST00000453262 NACADO15069 1562 aa16.21■□□□□ 0.18
TRBV21-1-201ENST00000453262 RB1CC1Q8TDY2 1594 aa16.18■□□□□ 0.18
TRBV21-1-201ENST00000453262 NPM3O75607 178 aaKnown RBP16.16■□□□□ 0.18
TRBV21-1-201ENST00000453262 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.18
TRBV21-1-201ENST00000453262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.07■□□□□ 0.16
TRBV21-1-201ENST00000453262 SCRIBQ14160 1630 aa15.97■□□□□ 0.15
TRBV21-1-201ENST00000453262 UNC13AQ9UPW8 1703 aa15.96■□□□□ 0.15
TRBV21-1-201ENST00000453262 SHROOM4Q9ULL8 1493 aa15.91■□□□□ 0.14
TRBV21-1-201ENST00000453262 KCNA4P22459 653 aa15.73■□□□□ 0.11
TRBV21-1-201ENST00000453262 U3KPZ7 1027 aaPredicted RBP15.71■□□□□ 0.11
TRBV21-1-201ENST00000453262 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
TRBV21-1-201ENST00000453262 PABPN1Q86U42 306 aaKnown RBP eCLIP15.62■□□□□ 0.09
TRBV21-1-201ENST00000453262 SPINK5Q9NQ38 1064 aaPredicted RBP15.54■□□□□ 0.08
TRBV21-1-201ENST00000453262 CAPN15O75808 1086 aa15.51■□□□□ 0.07
TRBV21-1-201ENST00000453262 SLC4A2P04920 1241 aa15.48■□□□□ 0.07
TRBV21-1-201ENST00000453262 DSG3P32926 999 aa15.45■□□□□ 0.06
TRBV21-1-201ENST00000453262 CECR2Q9BXF3 1484 aa15.32■□□□□ 0.04
TRBV21-1-201ENST00000453262 SMARCA4P51532 1647 aa15.26■□□□□ 0.03
TRBV21-1-201ENST00000453262 BAZ1AQ9NRL2 1556 aaPredicted RBP15.25■□□□□ 0.03
TRBV21-1-201ENST00000453262 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
TRBV21-1-201ENST00000453262 EIF4G1Q04637 1599 aaKnown RBP15.23■□□□□ 0.03
TRBV21-1-201ENST00000453262 MROH2BQ7Z745 1585 aa15.22■□□□□ 0.03
TRBV21-1-201ENST00000453262 APLP2Q06481 763 aa15.2■□□□□ 0.02
TRBV21-1-201ENST00000453262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
TRBV21-1-201ENST00000453262 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
TRBV21-1-201ENST00000453262 ABCB7O75027 752 aa15.16■□□□□ 0.02
TRBV21-1-201ENST00000453262 ZNF219Q9P2Y4 722 aaPredicted RBP15.16■□□□□ 0.02
TRBV21-1-201ENST00000453262 WIZO95785 1651 aa15.14■□□□□ 0.01
TRBV21-1-201ENST00000453262 SUPT5HO00267 1087 aaKnown RBP15.13■□□□□ 0.01
TRBV21-1-201ENST00000453262 RSF1Q96T23 1441 aaPredicted RBP15.13■□□□□ 0.01
TRBV21-1-201ENST00000453262 CC2D2AQ9P2K1 1620 aa15.1■□□□□ 0.01
TRBV21-1-201ENST00000453262 SAMD1Q6SPF0 538 aaPredicted RBP15.09■□□□□ 0.01
TRBV21-1-201ENST00000453262 SMARCA2P51531 1590 aa15.04■□□□□ -0
TRBV21-1-201ENST00000453262 PEG3Q9GZU2 1588 aa15.02□□□□□ -0.01
TRBV21-1-201ENST00000453262 POTEHQ6S545 545 aa15.01□□□□□ -0.01
TRBV21-1-201ENST00000453262 ATAD2BQ9ULI0 1458 aa15□□□□□ -0.01
TRBV21-1-201ENST00000453262 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
TRBV21-1-201ENST00000453262 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
TRBV21-1-201ENST00000453262 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
TRBV21-1-201ENST00000453262 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
TRBV21-1-201ENST00000453262 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
TRBV21-1-201ENST00000453262 SLC4A1APQ9BWU0 796 aaKnown RBP14.81□□□□□ -0.04
TRBV21-1-201ENST00000453262 POLA2Q14181 598 aa14.79□□□□□ -0.04
TRBV21-1-201ENST00000453262 CCDC88BA6NC98 1476 aa14.73□□□□□ -0.05
TRBV21-1-201ENST00000453262 RBM42Q9BTD8 480 aaKnown RBP14.7□□□□□ -0.06
TRBV21-1-201ENST00000453262 FOXD4L1Q9NU39 408 aa14.7□□□□□ -0.06
TRBV21-1-201ENST00000453262 ATF5Q9Y2D1 282 aaPredicted RBP14.65□□□□□ -0.06
TRBV21-1-201ENST00000453262 PRDM2Q13029 1718 aa14.62□□□□□ -0.07
TRBV21-1-201ENST00000453262 NESP48681 1621 aa14.55□□□□□ -0.08
TRBV21-1-201ENST00000453262 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.08
TRBV21-1-201ENST00000453262 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
TRBV21-1-201ENST00000453262 CFTRP13569 1480 aa14.5□□□□□ -0.09
TRBV21-1-201ENST00000453262 KIF21AQ7Z4S6 1674 aa14.47□□□□□ -0.09
TRBV21-1-201ENST00000453262 ZBTB22O15209 634 aa14.47□□□□□ -0.09
TRBV21-1-201ENST00000453262 CHRDL2Q6WN34 429 aa14.47□□□□□ -0.09
TRBV21-1-201ENST00000453262 ZBTB12Q9Y330 459 aaPredicted RBP14.42□□□□□ -0.1
TRBV21-1-201ENST00000453262 ABCC8Q09428 1581 aa14.39□□□□□ -0.11
TRBV21-1-201ENST00000453262 FANCD2Q9BXW9 1451 aa14.39□□□□□ -0.11
TRBV21-1-201ENST00000453262 PDS5BQ9NTI5 1447 aa14.37□□□□□ -0.11
TRBV21-1-201ENST00000453262 AKT1S1Q96B36 256 aa14.36□□□□□ -0.11
TRBV21-1-201ENST00000453262 CEP164Q9UPV0 1460 aa14.36□□□□□ -0.11
TRBV21-1-201ENST00000453262 ERCC6Q03468 1493 aa14.35□□□□□ -0.11
TRBV21-1-201ENST00000453262 OSCARQ8IYS5 282 aa14.32□□□□□ -0.12
TRBV21-1-201ENST00000453262 SYNJ1O43426 1573 aa14.28□□□□□ -0.12
TRBV21-1-201ENST00000453262 WRNQ14191 1432 aaPredicted RBP eCLIP14.27□□□□□ -0.12
TRBV21-1-201ENST00000453262 BIVM-ERCC5R4GMW8 1640 aa14.26□□□□□ -0.13
TRBV21-1-201ENST00000453262 CUX1P39880 1505 aa14.25□□□□□ -0.13
TRBV21-1-201ENST00000453262 REM2Q8IYK8 340 aaPredicted RBP14.25□□□□□ -0.13
TRBV21-1-201ENST00000453262 DNMBPQ6XZF7 1577 aa14.25□□□□□ -0.13
TRBV21-1-201ENST00000453262 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms