RNA–Protein interactions for RNA: ENST00000586885.1

LINC00663-203, long intergenic non-protein coding RNA 663, humanhuman

BASIC

Gene LINC00663, Length 2,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00663-203ENST00000586885 AEBP2Q6ZN18 517 aaPredicted RBP20.42■□□□□ 0.86
LINC00663-203ENST00000586885 CHIC1Q5VXU3 224 aa19.6■□□□□ 0.73
LINC00663-203ENST00000586885 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
LINC00663-203ENST00000586885 POTEDQ86YR6 584 aa17.7■□□□□ 0.42
LINC00663-203ENST00000586885 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
LINC00663-203ENST00000586885 FOXD1Q16676 465 aa16.67■□□□□ 0.26
LINC00663-203ENST00000586885 MSH5O43196 834 aa16.49■□□□□ 0.23
LINC00663-203ENST00000586885 NISCHQ9Y2I1 1504 aa15.86■□□□□ 0.13
LINC00663-203ENST00000586885 PIAS4Q8N2W9 510 aaPredicted RBP15.35■□□□□ 0.05
LINC00663-203ENST00000586885 CACNB1Q02641 598 aaPredicted RBP14.62□□□□□ -0.07
LINC00663-203ENST00000586885 PLPPR3Q6T4P5 718 aa14.46□□□□□ -0.1
LINC00663-203ENST00000586885 PPP6R1Q9UPN7 881 aa14.45□□□□□ -0.1
LINC00663-203ENST00000586885 ADRA2BP18089 450 aa14.4□□□□□ -0.1
LINC00663-203ENST00000586885 DNAJC5Q9H3Z4 198 aa14.31□□□□□ -0.12
LINC00663-203ENST00000586885 HRCP23327 699 aa14.17□□□□□ -0.14
LINC00663-203ENST00000586885 DMRT2Q9Y5R5 561 aa14.11□□□□□ -0.15
LINC00663-203ENST00000586885 CCDC180Q9P1Z9 1646 aa13.9□□□□□ -0.18
LINC00663-203ENST00000586885 PPARGC1BQ86YN6 1023 aaKnown RBP13.83□□□□□ -0.2
LINC00663-203ENST00000586885 SHROOM4Q9ULL8 1493 aa13.82□□□□□ -0.2
LINC00663-203ENST00000586885 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
LINC00663-203ENST00000586885 PCGF6Q9BYE7 350 aa13.81□□□□□ -0.2
LINC00663-203ENST00000586885 MYO15BQ96JP2 1530 aa13.79□□□□□ -0.2
LINC00663-203ENST00000586885 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
LINC00663-203ENST00000586885 PELP1Q8IZL8 1130 aaKnown RBP13.77□□□□□ -0.21
LINC00663-203ENST00000586885 RNF39Q9H2S5 420 aa13.72□□□□□ -0.21
LINC00663-203ENST00000586885 POTEHQ6S545 545 aa13.69□□□□□ -0.22
LINC00663-203ENST00000586885 ABCC9O60706 1549 aa13.67□□□□□ -0.22
LINC00663-203ENST00000586885 C1QBPQ07021 282 aaKnown RBP13.67□□□□□ -0.22
LINC00663-203ENST00000586885 DNAJC5BQ9UF47 199 aa13.65□□□□□ -0.22
LINC00663-203ENST00000586885 DCAF1Q9Y4B6 1507 aa13.54□□□□□ -0.24
LINC00663-203ENST00000586885 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
LINC00663-203ENST00000586885 MAPK8IP2Q13387 824 aaPredicted RBP13.49□□□□□ -0.25
LINC00663-203ENST00000586885 TRIM26Q12899 539 aaPredicted RBP13.37□□□□□ -0.27
LINC00663-203ENST00000586885 ZCCHC6Q5VYS8 1495 aaKnown RBP13.35□□□□□ -0.27
LINC00663-203ENST00000586885 LOC105371045A0A1W2PR82 267 aa13.3□□□□□ -0.28
LINC00663-203ENST00000586885 DCAF8L1A6NGE4 600 aa13.3□□□□□ -0.28
LINC00663-203ENST00000586885 ZEB1P37275 1124 aaPredicted RBP13.29□□□□□ -0.28
LINC00663-203ENST00000586885 MYT1Q01538 1121 aa13.24□□□□□ -0.29
LINC00663-203ENST00000586885 RB1CC1Q8TDY2 1594 aa13.21□□□□□ -0.3
LINC00663-203ENST00000586885 HOXD11P31277 338 aaPredicted RBP13.16□□□□□ -0.3
LINC00663-203ENST00000586885 CUX2O14529 1486 aa13.12□□□□□ -0.31
LINC00663-203ENST00000586885 ACIN1Q9UKV3 1341 aaKnown RBP13.08□□□□□ -0.32
LINC00663-203ENST00000586885 NACADO15069 1562 aa13.05□□□□□ -0.32
LINC00663-203ENST00000586885 NEUROD1Q13562 356 aa13.04□□□□□ -0.32
LINC00663-203ENST00000586885 GTF3C3Q9Y5Q9 886 aa12.96□□□□□ -0.33
LINC00663-203ENST00000586885 SCRIBQ14160 1630 aa12.96□□□□□ -0.34
LINC00663-203ENST00000586885 UNC13AQ9UPW8 1703 aa12.92□□□□□ -0.34
LINC00663-203ENST00000586885 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC00663-203ENST00000586885 CENPBP07199 599 aaPredicted RBP12.89□□□□□ -0.35
LINC00663-203ENST00000586885 DIEXFQ68CQ4 756 aaKnown RBP12.81□□□□□ -0.36
LINC00663-203ENST00000586885 RNF216Q9NWF9 866 aaPredicted RBP12.78□□□□□ -0.36
LINC00663-203ENST00000586885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.77□□□□□ -0.37
LINC00663-203ENST00000586885 TRIM41Q8WV44 630 aa12.76□□□□□ -0.37
LINC00663-203ENST00000586885 CCER1Q8TC90 406 aaPredicted RBP12.74□□□□□ -0.37
LINC00663-203ENST00000586885 FAM9AQ8IZU1 332 aaPredicted RBP12.73□□□□□ -0.37
LINC00663-203ENST00000586885 BICRAQ9NZM4 1560 aa12.73□□□□□ -0.37
LINC00663-203ENST00000586885 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
LINC00663-203ENST00000586885 RSF1Q96T23 1441 aaPredicted RBP12.61□□□□□ -0.39
LINC00663-203ENST00000586885 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
LINC00663-203ENST00000586885 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.4
LINC00663-203ENST00000586885 YTHDC1Q96MU7 727 aaKnown RBP12.57□□□□□ -0.4
LINC00663-203ENST00000586885 CC2D2AQ9P2K1 1620 aa12.57□□□□□ -0.4
LINC00663-203ENST00000586885 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
LINC00663-203ENST00000586885 MIER1Q8N108 512 aa12.47□□□□□ -0.41
LINC00663-203ENST00000586885 TTBK1Q5TCY1 1321 aaPredicted RBP12.46□□□□□ -0.42
LINC00663-203ENST00000586885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC00663-203ENST00000586885 WRNQ14191 1432 aaPredicted RBP eCLIP12.43□□□□□ -0.42
LINC00663-203ENST00000586885 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
LINC00663-203ENST00000586885 DSG3P32926 999 aa12.39□□□□□ -0.43
LINC00663-203ENST00000586885 PPP4R3CPQ6ZMV5 832 aa12.39□□□□□ -0.43
LINC00663-203ENST00000586885 BCL11AQ9H165 835 aa12.38□□□□□ -0.43
LINC00663-203ENST00000586885 ANP32EQ9BTT0 268 aa12.36□□□□□ -0.43
LINC00663-203ENST00000586885 SP7Q8TDD2 431 aaPredicted RBP12.36□□□□□ -0.43
LINC00663-203ENST00000586885 CLSPNQ9HAW4 1339 aa12.35□□□□□ -0.43
LINC00663-203ENST00000586885 SUPT16HQ9Y5B9 1047 aaKnown RBP12.34□□□□□ -0.43
LINC00663-203ENST00000586885 MROH2BQ7Z745 1585 aa12.33□□□□□ -0.44
LINC00663-203ENST00000586885 CEP162Q5TB80 1403 aa12.31□□□□□ -0.44
LINC00663-203ENST00000586885 TSHZ2Q9NRE2 1034 aa12.31□□□□□ -0.44
LINC00663-203ENST00000586885 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
LINC00663-203ENST00000586885 WIZO95785 1651 aa12.25□□□□□ -0.45
LINC00663-203ENST00000586885 BAZ1AQ9NRL2 1556 aaPredicted RBP12.25□□□□□ -0.45
LINC00663-203ENST00000586885 CSRNP3Q8WYN3 585 aa12.22□□□□□ -0.45
LINC00663-203ENST00000586885 RBM42Q9BTD8 480 aaKnown RBP12.22□□□□□ -0.45
LINC00663-203ENST00000586885 TNIKQ9UKE5 1360 aa12.22□□□□□ -0.45
LINC00663-203ENST00000586885 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
LINC00663-203ENST00000586885 CAPN15O75808 1086 aa12.16□□□□□ -0.46
LINC00663-203ENST00000586885 HNRNPUL2Q1KMD3 747 aaKnown RBP12.16□□□□□ -0.46
LINC00663-203ENST00000586885 ATAD2BQ9ULI0 1458 aa12.16□□□□□ -0.46
LINC00663-203ENST00000586885 ABCC8Q09428 1581 aa12.15□□□□□ -0.46
LINC00663-203ENST00000586885 APLP2Q06481 763 aa12.14□□□□□ -0.47
LINC00663-203ENST00000586885 ILDR1Q86SU0 546 aaPredicted RBP12.13□□□□□ -0.47
LINC00663-203ENST00000586885 SOGA1O94964 1423 aa12.13□□□□□ -0.47
LINC00663-203ENST00000586885 NCBP3Q53F19 620 aaKnown RBP12.1□□□□□ -0.47
LINC00663-203ENST00000586885 BAZ1BQ9UIG0 1483 aaKnown RBP12.09□□□□□ -0.47
LINC00663-203ENST00000586885 CHRDL2Q6WN34 429 aa12.09□□□□□ -0.47
LINC00663-203ENST00000586885 UBTFP17480 764 aaKnown RBP12.08□□□□□ -0.48
LINC00663-203ENST00000586885 EEA1Q15075 1411 aa12.08□□□□□ -0.48
LINC00663-203ENST00000586885 SMARCA2P51531 1590 aa12.08□□□□□ -0.48
LINC00663-203ENST00000586885 GOLGA3Q08378 1498 aa12.06□□□□□ -0.48
LINC00663-203ENST00000586885 RUSC2Q8N2Y8 1516 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms