Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 ZMAT4-201ENST00000297737 2466 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
SLC1A1P43005 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.79□□□□□ -1
SLC1A1P43005 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
SLC1A1P43005 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
SLC1A1P43005 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.79□□□□□ -1
SLC1A1P43005 AC024896.1-201ENST00000500632 2549 ntTSL 5 BASIC8.79□□□□□ -1
SLC1A1P43005 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
SLC1A1P43005 AC010200.1-201ENST00000547380 1454 ntBASIC8.79□□□□□ -1
SLC1A1P43005 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 TRAV20-201ENST00000390448 406 ntAPPRIS P1 BASIC8.79□□□□□ -1
SLC1A1P43005 AL031864.1-201ENST00000392075 423 ntBASIC8.79□□□□□ -1
SLC1A1P43005 MIR4435-2HG-208ENST00000439494 707 ntTSL 5 BASIC8.79□□□□□ -1
SLC1A1P43005 AP002381.1-201ENST00000439829 615 ntBASIC8.79□□□□□ -1
SLC1A1P43005 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC8.79□□□□□ -1
SLC1A1P43005 DEFT1P-201ENST00000453425 496 ntBASIC8.79□□□□□ -1
SLC1A1P43005 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 LINC00967-202ENST00000517725 259 ntTSL 2 BASIC8.79□□□□□ -1
SLC1A1P43005 RN7SL118P-201ENST00000580570 302 ntBASIC8.79□□□□□ -1
SLC1A1P43005 RN7SL198P-201ENST00000583190 258 ntBASIC8.79□□□□□ -1
SLC1A1P43005 RPL10P15-201ENST00000585756 315 ntBASIC8.79□□□□□ -1
SLC1A1P43005 AC005261.1-201ENST00000601567 712 ntTSL 2 BASIC8.79□□□□□ -1
SLC1A1P43005 AC245100.4-207ENST00000640776 1082 ntBASIC8.79□□□□□ -1
SLC1A1P43005 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 SULT1C2-201ENST00000251481 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 AL353763.2-201ENST00000623489 1903 ntBASIC8.79□□□□□ -1
SLC1A1P43005 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC8.79□□□□□ -1
SLC1A1P43005 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC8.79□□□□□ -1
SLC1A1P43005 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
SLC1A1P43005 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC8.79□□□□□ -1
SLC1A1P43005 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
SLC1A1P43005 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.79□□□□□ -1
SLC1A1P43005 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8.79□□□□□ -1
SLC1A1P43005 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.78□□□□□ -1
SLC1A1P43005 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SLC1A1P43005 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SLC1A1P43005 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
SLC1A1P43005 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC8.78□□□□□ -1
SLC1A1P43005 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC8.78□□□□□ -1
SLC1A1P43005 AC131392.2-201ENST00000505635 4332 ntBASIC8.78□□□□□ -1
SLC1A1P43005 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC8.78□□□□□ -1
SLC1A1P43005 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC8.78□□□□□ -1
SLC1A1P43005 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
SLC1A1P43005 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
SLC1A1P43005 ZNF449-202ENST00000370761 2051 ntTSL 2 BASIC8.78□□□□□ -1
SLC1A1P43005 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
SLC1A1P43005 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC8.78□□□□□ -1
SLC1A1P43005 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SLC1A1P43005 MIR425-201ENST00000362162 87 ntBASIC8.78□□□□□ -1
SLC1A1P43005 RNA5SP145-201ENST00000363124 125 ntBASIC8.78□□□□□ -1
SLC1A1P43005 RN7SKP48-201ENST00000365031 328 ntBASIC8.78□□□□□ -1
SLC1A1P43005 MOSPD1-202ENST00000370779 773 ntTSL 2 BASIC8.78□□□□□ -1
SLC1A1P43005 CAV2-203ENST00000393480 1179 ntTSL 2 BASIC8.78□□□□□ -1
SLC1A1P43005 RN7SKP42-201ENST00000410913 300 ntBASIC8.78□□□□□ -1
SLC1A1P43005 Z97987.1-202ENST00000411708 391 ntTSL 3 BASIC8.78□□□□□ -1
SLC1A1P43005 SNRPGP11-201ENST00000411777 232 ntBASIC8.78□□□□□ -1
SLC1A1P43005 BPI-202ENST00000417318 1082 ntTSL 5 BASIC8.78□□□□□ -1
SLC1A1P43005 KRT223P-201ENST00000422957 519 ntTSL 2 BASIC8.78□□□□□ -1
SLC1A1P43005 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC8.78□□□□□ -1
SLC1A1P43005 FUNDC2P4-201ENST00000441207 421 ntBASIC8.78□□□□□ -1
SLC1A1P43005 OR11Q1P-201ENST00000451582 877 ntBASIC8.78□□□□□ -1
SLC1A1P43005 AC099681.1-201ENST00000454777 552 ntTSL 4 BASIC8.78□□□□□ -1
SLC1A1P43005 RN7SL541P-201ENST00000464317 283 ntBASIC8.78□□□□□ -1
SLC1A1P43005 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC8.78□□□□□ -1
SLC1A1P43005 AC015909.1-201ENST00000509943 839 ntTSL 3 BASIC8.78□□□□□ -1
SLC1A1P43005 CRYAB-212ENST00000533280 545 ntTSL 2 BASIC8.78□□□□□ -1
SLC1A1P43005 PCED1B-AS1-204ENST00000547851 780 ntTSL 3 BASIC8.78□□□□□ -1
SLC1A1P43005 AC079598.4-201ENST00000549647 265 ntBASIC8.78□□□□□ -1
SLC1A1P43005 TP53TG3HP-201ENST00000563487 346 ntBASIC8.78□□□□□ -1
SLC1A1P43005 AC139099.1-203ENST00000570366 607 ntTSL 3 BASIC8.78□□□□□ -1
SLC1A1P43005 AC087393.3-201ENST00000584971 166 ntBASIC8.78□□□□□ -1
SLC1A1P43005 LINC00969-233ENST00000597871 839 ntTSL 5 BASIC8.78□□□□□ -1
SLC1A1P43005 AC020908.1-201ENST00000598893 280 ntTSL 3 BASIC8.78□□□□□ -1
SLC1A1P43005 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC8.78□□□□□ -1
SLC1A1P43005 AC026150.3-201ENST00000602595 499 ntBASIC8.78□□□□□ -1
SLC1A1P43005 AC007663.4-201ENST00000608275 631 ntBASIC8.78□□□□□ -1
SLC1A1P43005 AC024559.2-202ENST00000615240 529 ntTSL 5 BASIC8.78□□□□□ -1
SLC1A1P43005 LINC01727-202ENST00000623256 1218 ntTSL 4 BASIC8.78□□□□□ -1
SLC1A1P43005 CU633967.1-202ENST00000623449 560 ntTSL 5 BASIC8.78□□□□□ -1
SLC1A1P43005 CU638689.5-201ENST00000623892 1032 ntTSL 1 (best) BASIC8.78□□□□□ -1
SLC1A1P43005 AC010223.1-201ENST00000625092 279 ntBASIC8.78□□□□□ -1
SLC1A1P43005 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SLC1A1P43005 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.78□□□□□ -1
SLC1A1P43005 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC8.78□□□□□ -1
SLC1A1P43005 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SLC1A1P43005 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SLC1A1P43005 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC8.78□□□□□ -1
SLC1A1P43005 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC8.78□□□□□ -1
SLC1A1P43005 LINC02291-201ENST00000355909 1670 ntTSL 2 BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms