RNA–Protein interactions for RNA: ENST00000623892.1

CU638689.5-201, humanhuman

TSL 1 (best) BASIC

Gene CU638689.5, Length 1,032 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU638689.5-201ENST00000623892 AEBP2Q6ZN18 517 aaPredicted RBP30.8■■■□□ 2.52
CU638689.5-201ENST00000623892 CHIC1Q5VXU3 224 aa29.34■■■□□ 2.29
CU638689.5-201ENST00000623892 SENP3Q9H4L4 574 aaPredicted RBP26.42■■□□□ 1.82
CU638689.5-201ENST00000623892 PHF23Q9BUL5 403 aaPredicted RBP25.98■■□□□ 1.75
CU638689.5-201ENST00000623892 FOXD1Q16676 465 aa24.51■■□□□ 1.51
CU638689.5-201ENST00000623892 PLPPR3Q6T4P5 718 aa23.48■■□□□ 1.35
CU638689.5-201ENST00000623892 MSH5O43196 834 aa23.08■■□□□ 1.29
CU638689.5-201ENST00000623892 PIAS4Q8N2W9 510 aaPredicted RBP22.9■■□□□ 1.26
CU638689.5-201ENST00000623892 PPP6R1Q9UPN7 881 aa22.86■■□□□ 1.25
CU638689.5-201ENST00000623892 ADRA2BP18089 450 aa22.77■■□□□ 1.24
CU638689.5-201ENST00000623892 POTEDQ86YR6 584 aa22.44■■□□□ 1.18
CU638689.5-201ENST00000623892 NISCHQ9Y2I1 1504 aa22■■□□□ 1.11
CU638689.5-201ENST00000623892 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
CU638689.5-201ENST00000623892 DMRT2Q9Y5R5 561 aa20.94■□□□□ 0.94
CU638689.5-201ENST00000623892 MAPK8IP2Q13387 824 aaPredicted RBP20.88■□□□□ 0.93
CU638689.5-201ENST00000623892 PPP4R3CPQ6ZMV5 832 aa20.5■□□□□ 0.87
CU638689.5-201ENST00000623892 HOXD11P31277 338 aaPredicted RBP20.19■□□□□ 0.82
CU638689.5-201ENST00000623892 CNKSR2Q8WXI2 1034 aa20.19■□□□□ 0.82
CU638689.5-201ENST00000623892 RNF216Q9NWF9 866 aaPredicted RBP20.03■□□□□ 0.8
CU638689.5-201ENST00000623892 DCAF8L1A6NGE4 600 aa19.9■□□□□ 0.78
CU638689.5-201ENST00000623892 NCBP3Q53F19 620 aaKnown RBP19.81■□□□□ 0.76
CU638689.5-201ENST00000623892 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
CU638689.5-201ENST00000623892 ABCC9O60706 1549 aa19.73■□□□□ 0.75
CU638689.5-201ENST00000623892 CACNB1Q02641 598 aaPredicted RBP19.69■□□□□ 0.74
CU638689.5-201ENST00000623892 DNAJC5BQ9UF47 199 aa19.67■□□□□ 0.74
CU638689.5-201ENST00000623892 RNF39Q9H2S5 420 aa19.64■□□□□ 0.73
CU638689.5-201ENST00000623892 NPM3O75607 178 aaKnown RBP19.42■□□□□ 0.7
CU638689.5-201ENST00000623892 C1QBPQ07021 282 aaKnown RBP19.42■□□□□ 0.7
CU638689.5-201ENST00000623892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.14■□□□□ 0.65
CU638689.5-201ENST00000623892 KCNA4P22459 653 aa18.99■□□□□ 0.63
CU638689.5-201ENST00000623892 U3KPZ7 1027 aaPredicted RBP18.74■□□□□ 0.59
CU638689.5-201ENST00000623892 RB1CC1Q8TDY2 1594 aa18.65■□□□□ 0.58
CU638689.5-201ENST00000623892 NACADO15069 1562 aa18.6■□□□□ 0.57
CU638689.5-201ENST00000623892 SLC4A2P04920 1241 aa18.54■□□□□ 0.56
CU638689.5-201ENST00000623892 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
CU638689.5-201ENST00000623892 SPINK5Q9NQ38 1064 aaPredicted RBP18.4■□□□□ 0.54
CU638689.5-201ENST00000623892 CAPN15O75808 1086 aa18.39■□□□□ 0.53
CU638689.5-201ENST00000623892 APLP2Q06481 763 aa18.39■□□□□ 0.53
CU638689.5-201ENST00000623892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.36■□□□□ 0.53
CU638689.5-201ENST00000623892 DSG3P32926 999 aa18.36■□□□□ 0.53
CU638689.5-201ENST00000623892 HNRNPUL2Q1KMD3 747 aaKnown RBP18.36■□□□□ 0.53
CU638689.5-201ENST00000623892 UNC13AQ9UPW8 1703 aa18.33■□□□□ 0.52
CU638689.5-201ENST00000623892 ZCCHC6Q5VYS8 1495 aaKnown RBP18.3■□□□□ 0.52
CU638689.5-201ENST00000623892 DCAF1Q9Y4B6 1507 aa18.29■□□□□ 0.52
CU638689.5-201ENST00000623892 PABPN1Q86U42 306 aaKnown RBP eCLIP18.27■□□□□ 0.52
CU638689.5-201ENST00000623892 BICRAQ9NZM4 1560 aa18.23■□□□□ 0.51
CU638689.5-201ENST00000623892 SAMD1Q6SPF0 538 aaPredicted RBP18.22■□□□□ 0.51
CU638689.5-201ENST00000623892 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
CU638689.5-201ENST00000623892 ZNF219Q9P2Y4 722 aaPredicted RBP18.2■□□□□ 0.5
CU638689.5-201ENST00000623892 TRHP20396 242 aaPredicted RBP18.07■□□□□ 0.48
CU638689.5-201ENST00000623892 MYCNP04198 464 aaPredicted RBP18.04■□□□□ 0.48
CU638689.5-201ENST00000623892 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
CU638689.5-201ENST00000623892 SLC4A1APQ9BWU0 796 aaKnown RBP17.96■□□□□ 0.47
CU638689.5-201ENST00000623892 ABCB7O75027 752 aa17.9■□□□□ 0.46
CU638689.5-201ENST00000623892 SCRIBQ14160 1630 aa17.85■□□□□ 0.45
CU638689.5-201ENST00000623892 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.45
CU638689.5-201ENST00000623892 FOXD4L1Q9NU39 408 aa17.82■□□□□ 0.44
CU638689.5-201ENST00000623892 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.44
CU638689.5-201ENST00000623892 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
CU638689.5-201ENST00000623892 POLA2Q14181 598 aa17.64■□□□□ 0.41
CU638689.5-201ENST00000623892 RBM42Q9BTD8 480 aaKnown RBP17.62■□□□□ 0.41
CU638689.5-201ENST00000623892 POTEHQ6S545 545 aa17.58■□□□□ 0.4
CU638689.5-201ENST00000623892 ATF5Q9Y2D1 282 aaPredicted RBP17.47■□□□□ 0.39
CU638689.5-201ENST00000623892 ZBTB12Q9Y330 459 aaPredicted RBP17.45■□□□□ 0.38
CU638689.5-201ENST00000623892 ZBTB22O15209 634 aa17.44■□□□□ 0.38
CU638689.5-201ENST00000623892 ATXN8OSP0DMR3 200 aa17.39■□□□□ 0.37
CU638689.5-201ENST00000623892 DNAJC5Q9H3Z4 198 aa17.24■□□□□ 0.35
CU638689.5-201ENST00000623892 AKT1S1Q96B36 256 aa17.18■□□□□ 0.34
CU638689.5-201ENST00000623892 NCAPD3P42695 1498 aa17.15■□□□□ 0.34
CU638689.5-201ENST00000623892 CHRDL2Q6WN34 429 aa17.14■□□□□ 0.33
CU638689.5-201ENST00000623892 SMARCA4P51532 1647 aa17.13■□□□□ 0.33
CU638689.5-201ENST00000623892 SMARCA2P51531 1590 aa17.09■□□□□ 0.33
CU638689.5-201ENST00000623892 BAZ1AQ9NRL2 1556 aaPredicted RBP17.09■□□□□ 0.33
CU638689.5-201ENST00000623892 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
CU638689.5-201ENST00000623892 HMGXB3Q12766 1538 aa17.07■□□□□ 0.32
CU638689.5-201ENST00000623892 CUX2O14529 1486 aa17.06■□□□□ 0.32
CU638689.5-201ENST00000623892 PEG3Q9GZU2 1588 aa17.05■□□□□ 0.32
CU638689.5-201ENST00000623892 OSCARQ8IYS5 282 aa17.04■□□□□ 0.32
CU638689.5-201ENST00000623892 ERCC6Q03468 1493 aa16.98■□□□□ 0.31
CU638689.5-201ENST00000623892 REM2Q8IYK8 340 aaPredicted RBP16.95■□□□□ 0.3
CU638689.5-201ENST00000623892 FBLN2P98095 1184 aa16.93■□□□□ 0.3
CU638689.5-201ENST00000623892 NESP48681 1621 aa16.92■□□□□ 0.3
CU638689.5-201ENST00000623892 BAZ1BQ9UIG0 1483 aaKnown RBP16.91■□□□□ 0.3
CU638689.5-201ENST00000623892 MROH2BQ7Z745 1585 aa16.9■□□□□ 0.3
CU638689.5-201ENST00000623892 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
CU638689.5-201ENST00000623892 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
CU638689.5-201ENST00000623892 SPDYE2Q495Y8 402 aa16.86■□□□□ 0.29
CU638689.5-201ENST00000623892 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
CU638689.5-201ENST00000623892 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
CU638689.5-201ENST00000623892 PITPNM1O00562 1244 aa16.74■□□□□ 0.27
CU638689.5-201ENST00000623892 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.27
CU638689.5-201ENST00000623892 KIF21AQ7Z4S6 1674 aa16.71■□□□□ 0.27
CU638689.5-201ENST00000623892 PIP4P2Q8N4L2 257 aa16.7■□□□□ 0.26
CU638689.5-201ENST00000623892 WIZO95785 1651 aa16.69■□□□□ 0.26
CU638689.5-201ENST00000623892 FXR2P51116 673 aaKnown RBP eCLIP16.67■□□□□ 0.26
CU638689.5-201ENST00000623892 CSRNP3Q8WYN3 585 aa16.66■□□□□ 0.26
CU638689.5-201ENST00000623892 RSF1Q96T23 1441 aaPredicted RBP16.62■□□□□ 0.25
CU638689.5-201ENST00000623892 SSUH2Q9Y2M2 353 aa16.61■□□□□ 0.25
CU638689.5-201ENST00000623892 PDS5BQ9NTI5 1447 aa16.6■□□□□ 0.25
CU638689.5-201ENST00000623892 CADPSQ9ULU8 1353 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms