RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
SMN2-214ENST00000626847 CHIC1Q5VXU3 224 aa24.31■■□□□ 1.48
SMN2-214ENST00000626847 POTEDQ86YR6 584 aa23.23■■□□□ 1.31
SMN2-214ENST00000626847 SENP3Q9H4L4 574 aaPredicted RBP22.52■■□□□ 1.2
SMN2-214ENST00000626847 PHF23Q9BUL5 403 aaPredicted RBP21.87■■□□□ 1.09
SMN2-214ENST00000626847 FOXD1Q16676 465 aa21.08■□□□□ 0.97
SMN2-214ENST00000626847 MSH5O43196 834 aa20.62■□□□□ 0.89
SMN2-214ENST00000626847 PLPPR3Q6T4P5 718 aa19.42■□□□□ 0.7
SMN2-214ENST00000626847 PIAS4Q8N2W9 510 aaPredicted RBP19.34■□□□□ 0.69
SMN2-214ENST00000626847 CACNB1Q02641 598 aaPredicted RBP18.85■□□□□ 0.61
SMN2-214ENST00000626847 PPP6R1Q9UPN7 881 aa18.18■□□□□ 0.5
SMN2-214ENST00000626847 ADRA2BP18089 450 aa18.14■□□□□ 0.49
SMN2-214ENST00000626847 POTEHQ6S545 545 aa17.88■□□□□ 0.45
SMN2-214ENST00000626847 KCNA4P22459 653 aa17.52■□□□□ 0.4
SMN2-214ENST00000626847 DMRT2Q9Y5R5 561 aa17.5■□□□□ 0.39
SMN2-214ENST00000626847 RNF39Q9H2S5 420 aa17.32■□□□□ 0.36
SMN2-214ENST00000626847 PPP4R3CPQ6ZMV5 832 aa17.19■□□□□ 0.34
SMN2-214ENST00000626847 EHMT2Q96KQ7 1210 aa17.17■□□□□ 0.34
SMN2-214ENST00000626847 MAPK8IP2Q13387 824 aaPredicted RBP17.13■□□□□ 0.33
SMN2-214ENST00000626847 C1QBPQ07021 282 aaKnown RBP17.04■□□□□ 0.32
SMN2-214ENST00000626847 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
SMN2-214ENST00000626847 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
SMN2-214ENST00000626847 SLC4A1APQ9BWU0 796 aaKnown RBP16.85■□□□□ 0.29
SMN2-214ENST00000626847 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
SMN2-214ENST00000626847 NPM3O75607 178 aaKnown RBP16.66■□□□□ 0.26
SMN2-214ENST00000626847 CSRNP3Q8WYN3 585 aa16.57■□□□□ 0.24
SMN2-214ENST00000626847 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
SMN2-214ENST00000626847 NISCHQ9Y2I1 1504 aa16.54■□□□□ 0.24
SMN2-214ENST00000626847 ZBTB22O15209 634 aa16.09■□□□□ 0.17
SMN2-214ENST00000626847 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
SMN2-214ENST00000626847 RNF216Q9NWF9 866 aaPredicted RBP16.05■□□□□ 0.16
SMN2-214ENST00000626847 ABCC9O60706 1549 aa15.99■□□□□ 0.15
SMN2-214ENST00000626847 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
SMN2-214ENST00000626847 FOXD4L1Q9NU39 408 aa15.95■□□□□ 0.14
SMN2-214ENST00000626847 SP7Q8TDD2 431 aaPredicted RBP15.88■□□□□ 0.13
SMN2-214ENST00000626847 PLSCR2Q9NRY7 297 aa15.61■□□□□ 0.09
SMN2-214ENST00000626847 DSG3P32926 999 aa15.57■□□□□ 0.08
SMN2-214ENST00000626847 SLC4A2P04920 1241 aa15.53■□□□□ 0.08
SMN2-214ENST00000626847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.43■□□□□ 0.06
SMN2-214ENST00000626847 MYCNP04198 464 aaPredicted RBP15.41■□□□□ 0.06
SMN2-214ENST00000626847 MYT1Q01538 1121 aa15.41■□□□□ 0.06
SMN2-214ENST00000626847 DNAJC5Q9H3Z4 198 aa15.41■□□□□ 0.06
SMN2-214ENST00000626847 CHRDL2Q6WN34 429 aa15.4■□□□□ 0.06
SMN2-214ENST00000626847 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
SMN2-214ENST00000626847 PELP1Q8IZL8 1130 aaKnown RBP15.32■□□□□ 0.04
SMN2-214ENST00000626847 CAPN15O75808 1086 aa15.31■□□□□ 0.04
SMN2-214ENST00000626847 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
SMN2-214ENST00000626847 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
SMN2-214ENST00000626847 RBM42Q9BTD8 480 aaKnown RBP15.07■□□□□ 0
SMN2-214ENST00000626847 FKBP8Q14318 412 aa15.01□□□□□ -0.01
SMN2-214ENST00000626847 TTBK1Q5TCY1 1321 aaPredicted RBP15.01□□□□□ -0.01
SMN2-214ENST00000626847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15□□□□□ -0.01
SMN2-214ENST00000626847 HNRNPUL2Q1KMD3 747 aaKnown RBP15□□□□□ -0.01
SMN2-214ENST00000626847 SAMD1Q6SPF0 538 aaPredicted RBP14.97□□□□□ -0.01
SMN2-214ENST00000626847 HAX1O00165 279 aa14.92□□□□□ -0.02
SMN2-214ENST00000626847 ATF5Q9Y2D1 282 aaPredicted RBP14.91□□□□□ -0.02
SMN2-214ENST00000626847 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
SMN2-214ENST00000626847 LHX8Q68G74 356 aa14.88□□□□□ -0.03
SMN2-214ENST00000626847 AMER1Q5JTC6 1135 aaPredicted RBP14.83□□□□□ -0.03
SMN2-214ENST00000626847 RB1CC1Q8TDY2 1594 aa14.82□□□□□ -0.04
SMN2-214ENST00000626847 RTN4Q9NQC3 1192 aaKnown RBP14.78□□□□□ -0.04
SMN2-214ENST00000626847 PABPN1Q86U42 306 aaKnown RBP eCLIP14.77□□□□□ -0.04
SMN2-214ENST00000626847 APLP2Q06481 763 aa14.72□□□□□ -0.05
SMN2-214ENST00000626847 ABCB7O75027 752 aa14.71□□□□□ -0.05
SMN2-214ENST00000626847 ZNF219Q9P2Y4 722 aaPredicted RBP14.64□□□□□ -0.07
SMN2-214ENST00000626847 TRHP20396 242 aaPredicted RBP14.58□□□□□ -0.07
SMN2-214ENST00000626847 PIP4P2Q8N4L2 257 aa14.58□□□□□ -0.08
SMN2-214ENST00000626847 NACADO15069 1562 aa14.53□□□□□ -0.08
SMN2-214ENST00000626847 SLC24A1O60721 1099 aa14.49□□□□□ -0.09
SMN2-214ENST00000626847 CECR2Q9BXF3 1484 aa14.48□□□□□ -0.09
SMN2-214ENST00000626847 UNC13AQ9UPW8 1703 aa14.47□□□□□ -0.09
SMN2-214ENST00000626847 BICRAQ9NZM4 1560 aa14.46□□□□□ -0.1
SMN2-214ENST00000626847 EVX2Q03828 476 aa14.39□□□□□ -0.11
SMN2-214ENST00000626847 CC2D2AQ9P2K1 1620 aa14.38□□□□□ -0.11
SMN2-214ENST00000626847 SPDYE4A6NLX3 237 aa14.35□□□□□ -0.11
SMN2-214ENST00000626847 FBLN2P98095 1184 aa14.33□□□□□ -0.11
SMN2-214ENST00000626847 FBXO3Q9UK99 471 aa14.31□□□□□ -0.12
SMN2-214ENST00000626847 DCAF8L2P0C7V8 631 aa14.3□□□□□ -0.12
SMN2-214ENST00000626847 MKRN4PQ13434 485 aaPredicted RBP14.27□□□□□ -0.12
SMN2-214ENST00000626847 POLA2Q14181 598 aa14.26□□□□□ -0.13
SMN2-214ENST00000626847 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
SMN2-214ENST00000626847 ERICH6Q7L0X2 663 aa14.2□□□□□ -0.14
SMN2-214ENST00000626847 FXR2P51116 673 aaKnown RBP eCLIP14.17□□□□□ -0.14
SMN2-214ENST00000626847 EIF4G1Q04637 1599 aaKnown RBP14.15□□□□□ -0.14
SMN2-214ENST00000626847 SHROOM4Q9ULL8 1493 aa14.15□□□□□ -0.14
SMN2-214ENST00000626847 POTEMA6NI47 508 aa14.12□□□□□ -0.15
SMN2-214ENST00000626847 CUX2O14529 1486 aa14.09□□□□□ -0.15
SMN2-214ENST00000626847 PROM2Q8N271 834 aa14.08□□□□□ -0.15
SMN2-214ENST00000626847 PCDH10Q9P2E7 1040 aa14.08□□□□□ -0.15
SMN2-214ENST00000626847 ZBTB12Q9Y330 459 aaPredicted RBP14.08□□□□□ -0.15
SMN2-214ENST00000626847 MYO15BQ96JP2 1530 aa14.08□□□□□ -0.16
SMN2-214ENST00000626847 GABBR2O75899 941 aa14.07□□□□□ -0.16
SMN2-214ENST00000626847 REM2Q8IYK8 340 aaPredicted RBP14.07□□□□□ -0.16
SMN2-214ENST00000626847 VASPP50552 380 aaPredicted RBP14.05□□□□□ -0.16
SMN2-214ENST00000626847 TRIM41Q8WV44 630 aa14.02□□□□□ -0.16
SMN2-214ENST00000626847 POTEGQ6S5H5 508 aa14□□□□□ -0.17
SMN2-214ENST00000626847 PITPNM1O00562 1244 aa13.93□□□□□ -0.18
SMN2-214ENST00000626847 IFNLR1Q8IU57 520 aaPredicted RBP13.89□□□□□ -0.19
SMN2-214ENST00000626847 PRKCSHP14314 528 aaPredicted RBP13.85□□□□□ -0.19
SMN2-214ENST00000626847 ZNF692Q9BU19 519 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms