RNA–Protein interactions for RNA: ENST00000422957.1

KRT223P-201, Transcript of keratin 223 pseudogene, humanhuman

TSL 2 BASIC

Gene KRT223P, Length 519 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT223P-201ENST00000422957 AEBP2Q6ZN18 517 aaPredicted RBP25.54■■□□□ 1.68
KRT223P-201ENST00000422957 CHIC1Q5VXU3 224 aa24.03■■□□□ 1.44
KRT223P-201ENST00000422957 SENP3Q9H4L4 574 aaPredicted RBP21.66■■□□□ 1.06
KRT223P-201ENST00000422957 PHF23Q9BUL5 403 aaPredicted RBP21.44■■□□□ 1.02
KRT223P-201ENST00000422957 NISCHQ9Y2I1 1504 aa20.77■□□□□ 0.92
KRT223P-201ENST00000422957 FOXD1Q16676 465 aa20.31■□□□□ 0.84
KRT223P-201ENST00000422957 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
KRT223P-201ENST00000422957 PPP6R1Q9UPN7 881 aa18.95■□□□□ 0.62
KRT223P-201ENST00000422957 MSH5O43196 834 aa18.93■□□□□ 0.62
KRT223P-201ENST00000422957 PIAS4Q8N2W9 510 aaPredicted RBP18.91■□□□□ 0.62
KRT223P-201ENST00000422957 ADRA2BP18089 450 aa18.86■□□□□ 0.61
KRT223P-201ENST00000422957 POTEDQ86YR6 584 aa18.83■□□□□ 0.6
KRT223P-201ENST00000422957 CCDC180Q9P1Z9 1646 aa18.41■□□□□ 0.54
KRT223P-201ENST00000422957 ABCC9O60706 1549 aa17.98■□□□□ 0.47
KRT223P-201ENST00000422957 MAPK8IP2Q13387 824 aaPredicted RBP17.4■□□□□ 0.38
KRT223P-201ENST00000422957 DCAF8L2P0C7V8 631 aa17.36■□□□□ 0.37
KRT223P-201ENST00000422957 NACADO15069 1562 aa17.32■□□□□ 0.36
KRT223P-201ENST00000422957 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
KRT223P-201ENST00000422957 ZCCHC6Q5VYS8 1495 aaKnown RBP17.3■□□□□ 0.36
KRT223P-201ENST00000422957 MYO15BQ96JP2 1530 aa17.24■□□□□ 0.35
KRT223P-201ENST00000422957 DMRT2Q9Y5R5 561 aa17.19■□□□□ 0.34
KRT223P-201ENST00000422957 DCAF1Q9Y4B6 1507 aa17.18■□□□□ 0.34
KRT223P-201ENST00000422957 SCAF1Q9H7N4 1312 aaKnown RBP17.07■□□□□ 0.32
KRT223P-201ENST00000422957 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
KRT223P-201ENST00000422957 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
KRT223P-201ENST00000422957 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
KRT223P-201ENST00000422957 SCRIBQ14160 1630 aa16.8■□□□□ 0.28
KRT223P-201ENST00000422957 PPP4R3CPQ6ZMV5 832 aa16.77■□□□□ 0.28
KRT223P-201ENST00000422957 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
KRT223P-201ENST00000422957 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
KRT223P-201ENST00000422957 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
KRT223P-201ENST00000422957 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
KRT223P-201ENST00000422957 CNKSR2Q8WXI2 1034 aa16.43■□□□□ 0.22
KRT223P-201ENST00000422957 CACNB1Q02641 598 aaPredicted RBP16.4■□□□□ 0.22
KRT223P-201ENST00000422957 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
KRT223P-201ENST00000422957 RNF216Q9NWF9 866 aaPredicted RBP16.32■□□□□ 0.2
KRT223P-201ENST00000422957 CC2D2AQ9P2K1 1620 aa16.27■□□□□ 0.2
KRT223P-201ENST00000422957 RNF39Q9H2S5 420 aa16.21■□□□□ 0.19
KRT223P-201ENST00000422957 CECR2Q9BXF3 1484 aa16.18■□□□□ 0.18
KRT223P-201ENST00000422957 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
KRT223P-201ENST00000422957 SMARCA4P51532 1647 aa16.08■□□□□ 0.17
KRT223P-201ENST00000422957 MROH2BQ7Z745 1585 aa16.01■□□□□ 0.15
KRT223P-201ENST00000422957 ATAD2BQ9ULI0 1458 aa16■□□□□ 0.15
KRT223P-201ENST00000422957 NCAPD3P42695 1498 aa15.99■□□□□ 0.15
KRT223P-201ENST00000422957 NCBP3Q53F19 620 aaKnown RBP15.98■□□□□ 0.15
KRT223P-201ENST00000422957 SMARCA2P51531 1590 aa15.96■□□□□ 0.15
KRT223P-201ENST00000422957 PEG3Q9GZU2 1588 aa15.94■□□□□ 0.14
KRT223P-201ENST00000422957 C1QBPQ07021 282 aaKnown RBP15.9■□□□□ 0.14
KRT223P-201ENST00000422957 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
KRT223P-201ENST00000422957 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
KRT223P-201ENST00000422957 RSF1Q96T23 1441 aaPredicted RBP15.85■□□□□ 0.13
KRT223P-201ENST00000422957 BAZ1BQ9UIG0 1483 aaKnown RBP15.85■□□□□ 0.13
KRT223P-201ENST00000422957 WIZO95785 1651 aa15.84■□□□□ 0.13
KRT223P-201ENST00000422957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.73■□□□□ 0.11
KRT223P-201ENST00000422957 TOP2AP11388 1531 aaKnown RBP15.65■□□□□ 0.1
KRT223P-201ENST00000422957 NESP48681 1621 aa15.58■□□□□ 0.09
KRT223P-201ENST00000422957 LAMC3Q9Y6N6 1575 aa15.55■□□□□ 0.08
KRT223P-201ENST00000422957 CADPSQ9ULU8 1353 aa15.53■□□□□ 0.08
KRT223P-201ENST00000422957 SUPT5HO00267 1087 aaKnown RBP15.5■□□□□ 0.07
KRT223P-201ENST00000422957 CCDC88BA6NC98 1476 aa15.5■□□□□ 0.07
KRT223P-201ENST00000422957 KCNA4P22459 653 aa15.49■□□□□ 0.07
KRT223P-201ENST00000422957 ERCC6Q03468 1493 aa15.47■□□□□ 0.07
KRT223P-201ENST00000422957 CFTRP13569 1480 aa15.45■□□□□ 0.06
KRT223P-201ENST00000422957 PDS5BQ9NTI5 1447 aa15.44■□□□□ 0.06
KRT223P-201ENST00000422957 U3KPZ7 1027 aaPredicted RBP15.43■□□□□ 0.06
KRT223P-201ENST00000422957 KIF21AQ7Z4S6 1674 aa15.39■□□□□ 0.05
KRT223P-201ENST00000422957 FANCD2Q9BXW9 1451 aa15.33■□□□□ 0.05
KRT223P-201ENST00000422957 THOC2Q8NI27 1593 aaKnown RBP15.32■□□□□ 0.04
KRT223P-201ENST00000422957 PRDM2Q13029 1718 aa15.31■□□□□ 0.04
KRT223P-201ENST00000422957 CUX2O14529 1486 aa15.3■□□□□ 0.04
KRT223P-201ENST00000422957 CEP164Q9UPV0 1460 aa15.3■□□□□ 0.04
KRT223P-201ENST00000422957 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
KRT223P-201ENST00000422957 MRC2Q9UBG0 1479 aa15.27■□□□□ 0.03
KRT223P-201ENST00000422957 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
KRT223P-201ENST00000422957 WDR62O43379 1518 aa15.22■□□□□ 0.03
KRT223P-201ENST00000422957 CAPN15O75808 1086 aa15.2■□□□□ 0.02
KRT223P-201ENST00000422957 URB2Q14146 1524 aaKnown RBP15.18■□□□□ 0.02
KRT223P-201ENST00000422957 DSG3P32926 999 aa15.15■□□□□ 0.02
KRT223P-201ENST00000422957 ABCC8Q09428 1581 aa15.11■□□□□ 0.01
KRT223P-201ENST00000422957 TOPBP1Q92547 1522 aa15.1■□□□□ 0.01
KRT223P-201ENST00000422957 DNMBPQ6XZF7 1577 aa15.07■□□□□ 0
KRT223P-201ENST00000422957 CUX1P39880 1505 aa15.01□□□□□ -0.01
KRT223P-201ENST00000422957 IFT140Q96RY7 1462 aa14.98□□□□□ -0.01
KRT223P-201ENST00000422957 POLA1P09884 1462 aaPredicted RBP14.97□□□□□ -0.01
KRT223P-201ENST00000422957 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
KRT223P-201ENST00000422957 FGD5Q6ZNL6 1462 aa14.95□□□□□ -0.02
KRT223P-201ENST00000422957 SOGA1O94964 1423 aa14.93□□□□□ -0.02
KRT223P-201ENST00000422957 WRNQ14191 1432 aaPredicted RBP eCLIP14.93□□□□□ -0.02
KRT223P-201ENST00000422957 TARBP1Q13395 1621 aaKnown RBP14.93□□□□□ -0.02
KRT223P-201ENST00000422957 ZNF608Q9ULD9 1512 aaPredicted RBP14.92□□□□□ -0.02
KRT223P-201ENST00000422957 RAD54L2Q9Y4B4 1467 aa14.92□□□□□ -0.02
KRT223P-201ENST00000422957 ABCB7O75027 752 aa14.9□□□□□ -0.02
KRT223P-201ENST00000422957 TOP2BQ02880 1626 aa14.89□□□□□ -0.03
KRT223P-201ENST00000422957 BIVM-ERCC5R4GMW8 1640 aa14.88□□□□□ -0.03
KRT223P-201ENST00000422957 SYNJ1O43426 1573 aa14.88□□□□□ -0.03
KRT223P-201ENST00000422957 AQRO60306 1485 aaKnown RBP eCLIP14.85□□□□□ -0.03
KRT223P-201ENST00000422957 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
KRT223P-201ENST00000422957 TDRD9Q8NDG6 1382 aaKnown RBP14.85□□□□□ -0.03
KRT223P-201ENST00000422957 DNAJC5Q9H3Z4 198 aa14.82□□□□□ -0.04
KRT223P-201ENST00000422957 ZNF219Q9P2Y4 722 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms