Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 Z82202.1-201ENST00000623446 1880 ntBASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 AC046158.3-201ENST00000624947 2558 ntBASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 AC026471.6-201ENST00000622954 1905 ntBASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 AL031258.1-201ENST00000623562 325 ntBASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 BID-203ENST00000399765 1879 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC10.61□□□□□ -0.71
LINC01558Q9Y6Z2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01558Q9Y6Z2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 AC090877.2-201ENST00000558441 1738 ntBASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms