Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC38.93■■■■□ 3.82
SHROOM4Q9ULL8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC38.93■■■■□ 3.82
SHROOM4Q9ULL8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC38.93■■■■□ 3.82
SHROOM4Q9ULL8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
SHROOM4Q9ULL8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
SHROOM4Q9ULL8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC38.93■■■■□ 3.82
SHROOM4Q9ULL8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 GOLGA2P6-201ENST00000340929 2049 ntBASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC38.92■■■■□ 3.82
SHROOM4Q9ULL8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
SHROOM4Q9ULL8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC38.91■■■■□ 3.82
SHROOM4Q9ULL8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC38.91■■■■□ 3.82
SHROOM4Q9ULL8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC38.91■■■■□ 3.82
SHROOM4Q9ULL8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
SHROOM4Q9ULL8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
SHROOM4Q9ULL8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC38.91■■■■□ 3.82
SHROOM4Q9ULL8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC38.91■■■■□ 3.82
SHROOM4Q9ULL8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
SHROOM4Q9ULL8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC38.91■■■■□ 3.82
SHROOM4Q9ULL8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC38.91■■■■□ 3.82
SHROOM4Q9ULL8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
SHROOM4Q9ULL8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC38.9■■■■□ 3.82
SHROOM4Q9ULL8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
SHROOM4Q9ULL8 EP400NL-214ENST00000641289 2402 ntBASIC38.9■■■■□ 3.82
SHROOM4Q9ULL8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC38.9■■■■□ 3.82
SHROOM4Q9ULL8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
SHROOM4Q9ULL8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC38.9■■■■□ 3.82
SHROOM4Q9ULL8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC38.9■■■■□ 3.82
SHROOM4Q9ULL8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC38.9■■■■□ 3.82
SHROOM4Q9ULL8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC38.9■■■■□ 3.82
SHROOM4Q9ULL8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC38.9■■■■□ 3.82
SHROOM4Q9ULL8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC38.9■■■■□ 3.82
SHROOM4Q9ULL8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC38.9■■■■□ 3.82
SHROOM4Q9ULL8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
SHROOM4Q9ULL8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC38.89■■■■□ 3.82
SHROOM4Q9ULL8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC38.89■■■■□ 3.82
SHROOM4Q9ULL8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
SHROOM4Q9ULL8 NME3-204ENST00000563498 920 ntTSL 2 BASIC38.89■■■■□ 3.82
SHROOM4Q9ULL8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC38.89■■■■□ 3.82
SHROOM4Q9ULL8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
SHROOM4Q9ULL8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC38.88■■■■□ 3.82
SHROOM4Q9ULL8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC38.88■■■■□ 3.82
SHROOM4Q9ULL8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
SHROOM4Q9ULL8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
SHROOM4Q9ULL8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC38.88■■■■□ 3.81
SHROOM4Q9ULL8 AL049597.2-201ENST00000565575 961 ntBASIC38.88■■■■□ 3.81
SHROOM4Q9ULL8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC38.88■■■■□ 3.81
SHROOM4Q9ULL8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC38.88■■■■□ 3.81
SHROOM4Q9ULL8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC38.88■■■■□ 3.81
SHROOM4Q9ULL8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC38.88■■■■□ 3.81
SHROOM4Q9ULL8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC38.88■■■■□ 3.81
SHROOM4Q9ULL8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC38.88■■■■□ 3.81
SHROOM4Q9ULL8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC38.87■■■■□ 3.81
SHROOM4Q9ULL8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
SHROOM4Q9ULL8 AL023875.1-201ENST00000640777 796 ntBASIC38.87■■■■□ 3.81
SHROOM4Q9ULL8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC38.87■■■■□ 3.81
SHROOM4Q9ULL8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC38.87■■■■□ 3.81
SHROOM4Q9ULL8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC38.87■■■■□ 3.81
SHROOM4Q9ULL8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC38.87■■■■□ 3.81
SHROOM4Q9ULL8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC38.87■■■■□ 3.81
SHROOM4Q9ULL8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC38.87■■■■□ 3.81
SHROOM4Q9ULL8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC38.86■■■■□ 3.81
SHROOM4Q9ULL8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
SHROOM4Q9ULL8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC38.86■■■■□ 3.81
SHROOM4Q9ULL8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
SHROOM4Q9ULL8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC38.86■■■■□ 3.81
SHROOM4Q9ULL8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC38.86■■■■□ 3.81
SHROOM4Q9ULL8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC38.86■■■■□ 3.81
SHROOM4Q9ULL8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC38.86■■■■□ 3.81
SHROOM4Q9ULL8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC38.86■■■■□ 3.81
SHROOM4Q9ULL8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC38.86■■■■□ 3.81
SHROOM4Q9ULL8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC38.86■■■■□ 3.81
SHROOM4Q9ULL8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC38.86■■■■□ 3.81
SHROOM4Q9ULL8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC38.86■■■■□ 3.81
SHROOM4Q9ULL8 AC026471.5-201ENST00000615068 467 ntBASIC38.86■■■■□ 3.81
SHROOM4Q9ULL8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC38.86■■■■□ 3.81
SHROOM4Q9ULL8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC38.85■■■■□ 3.81
SHROOM4Q9ULL8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC38.85■■■■□ 3.81
SHROOM4Q9ULL8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
SHROOM4Q9ULL8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
SHROOM4Q9ULL8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
SHROOM4Q9ULL8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC38.85■■■■□ 3.81
SHROOM4Q9ULL8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
SHROOM4Q9ULL8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC38.85■■■■□ 3.81
SHROOM4Q9ULL8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
SHROOM4Q9ULL8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC38.85■■■■□ 3.81
SHROOM4Q9ULL8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms