Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKIPSDQ9NZQ3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NCKIPSDQ9NZQ3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKIPSDQ9NZQ3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NCKIPSDQ9NZQ3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKIPSDQ9NZQ3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKIPSDQ9NZQ3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NCKIPSDQ9NZQ3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKIPSDQ9NZQ3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.54■□□□□ 0.88
NCKIPSDQ9NZQ3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.54■□□□□ 0.88
NCKIPSDQ9NZQ3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKIPSDQ9NZQ3 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.54■□□□□ 0.88
NCKIPSDQ9NZQ3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NCKIPSDQ9NZQ3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKIPSDQ9NZQ3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
NCKIPSDQ9NZQ3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 AL591742.1-201ENST00000604433 565 ntBASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 PLK5-205ENST00000642079 1969 ntBASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCKIPSDQ9NZQ3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCKIPSDQ9NZQ3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
NCKIPSDQ9NZQ3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCKIPSDQ9NZQ3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCKIPSDQ9NZQ3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCKIPSDQ9NZQ3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.52■□□□□ 0.88
NCKIPSDQ9NZQ3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.52■□□□□ 0.88
NCKIPSDQ9NZQ3 AC243732.1-201ENST00000612648 864 ntBASIC20.52■□□□□ 0.88
NCKIPSDQ9NZQ3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
NCKIPSDQ9NZQ3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.52■□□□□ 0.88
NCKIPSDQ9NZQ3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCKIPSDQ9NZQ3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCKIPSDQ9NZQ3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.52■□□□□ 0.88
NCKIPSDQ9NZQ3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
NCKIPSDQ9NZQ3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NCKIPSDQ9NZQ3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NCKIPSDQ9NZQ3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.52■□□□□ 0.87
NCKIPSDQ9NZQ3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NCKIPSDQ9NZQ3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 GABARAPL3-202ENST00000624044 1851 ntBASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCKIPSDQ9NZQ3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms