Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 OXCT2P1-201ENST00000447263 1535 ntBASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 AC084018.2-201ENST00000613093 2607 ntBASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC10.53□□□□□ -0.72
CDC42SE1Q9NRR8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CDC42SE1Q9NRR8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
CDC42SE1Q9NRR8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CDC42SE1Q9NRR8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.72
CDC42SE1Q9NRR8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CDC42SE1Q9NRR8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 MKRN4P-201ENST00000444706 1521 ntBASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 AC125437.2-201ENST00000625180 2167 ntBASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 AC135050.7-201ENST00000624508 2218 ntBASIC10.52□□□□□ -0.73
CDC42SE1Q9NRR8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 FST-202ENST00000396947 2538 ntTSL 5 BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms