Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 AC007322.3-201ENST00000426526 701 ntBASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 KRT19P1-201ENST00000405746 1186 ntBASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRTM1Q9HBL6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRTM1Q9HBL6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRTM1Q9HBL6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRTM1Q9HBL6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LRTM1Q9HBL6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.54■□□□□ 0.72
LRTM1Q9HBL6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
LRTM1Q9HBL6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRTM1Q9HBL6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRTM1Q9HBL6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRTM1Q9HBL6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRTM1Q9HBL6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.54■□□□□ 0.72
LRTM1Q9HBL6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRTM1Q9HBL6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LRTM1Q9HBL6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRTM1Q9HBL6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM1Q9HBL6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRTM1Q9HBL6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRTM1Q9HBL6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.52■□□□□ 0.72
LRTM1Q9HBL6 SMG8-203ENST00000578922 2178 ntBASIC19.52■□□□□ 0.72
LRTM1Q9HBL6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRTM1Q9HBL6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms