Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 AL162412.1-201ENST00000567129 965 ntBASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 MFSD11-216ENST00000590393 1141 ntBASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LRRC40Q9H9A6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 KRT8P36-201ENST00000489121 1440 ntBASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 AL162377.1-201ENST00000618844 1793 ntBASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 AL512408.1-201ENST00000569378 2000 ntBASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LRRC40Q9H9A6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 AC006015.1-201ENST00000429970 570 ntBASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 AL162430.1-201ENST00000480705 870 ntBASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC40Q9H9A6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.64■□□□□ 0.9
LRRC40Q9H9A6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.64■□□□□ 0.9
LRRC40Q9H9A6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC40Q9H9A6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
LRRC40Q9H9A6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC40Q9H9A6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC40Q9H9A6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC40Q9H9A6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC40Q9H9A6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC40Q9H9A6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC40Q9H9A6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.64■□□□□ 0.89
LRRC40Q9H9A6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC40Q9H9A6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.64■□□□□ 0.89
LRRC40Q9H9A6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.64■□□□□ 0.89
LRRC40Q9H9A6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC40Q9H9A6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 PGM5P4-201ENST00000421970 445 ntBASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC40Q9H9A6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms