Protein–RNA interactions for Protein: Q9H5F2

C11orf1, UPF0686 protein C11orf1, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf1Q9H5F2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf1Q9H5F2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.31■□□□□ 0.2
C11orf1Q9H5F2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.31■□□□□ 0.2
C11orf1Q9H5F2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf1Q9H5F2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf1Q9H5F2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.31■□□□□ 0.2
C11orf1Q9H5F2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf1Q9H5F2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
C11orf1Q9H5F2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf1Q9H5F2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf1Q9H5F2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.31■□□□□ 0.2
C11orf1Q9H5F2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
C11orf1Q9H5F2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 NEFHP1-201ENST00000412845 2629 ntBASIC16.3■□□□□ 0.2
C11orf1Q9H5F2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf1Q9H5F2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf1Q9H5F2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf1Q9H5F2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
C11orf1Q9H5F2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf1Q9H5F2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.29■□□□□ 0.2
C11orf1Q9H5F2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.29■□□□□ 0.2
C11orf1Q9H5F2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf1Q9H5F2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf1Q9H5F2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf1Q9H5F2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.29■□□□□ 0.2
C11orf1Q9H5F2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf1Q9H5F2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf1Q9H5F2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf1Q9H5F2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 RARRES2P1-201ENST00000474487 481 ntBASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.28■□□□□ 0.2
C11orf1Q9H5F2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf1Q9H5F2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf1Q9H5F2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
C11orf1Q9H5F2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf1Q9H5F2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
C11orf1Q9H5F2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf1Q9H5F2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf1Q9H5F2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf1Q9H5F2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf1Q9H5F2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
C11orf1Q9H5F2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
C11orf1Q9H5F2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.27■□□□□ 0.2
C11orf1Q9H5F2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.27■□□□□ 0.2
C11orf1Q9H5F2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
C11orf1Q9H5F2 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.27■□□□□ 0.2
C11orf1Q9H5F2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C11orf1Q9H5F2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
C11orf1Q9H5F2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C11orf1Q9H5F2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.27■□□□□ 0.19
C11orf1Q9H5F2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
C11orf1Q9H5F2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.27■□□□□ 0.19
C11orf1Q9H5F2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
C11orf1Q9H5F2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
C11orf1Q9H5F2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C11orf1Q9H5F2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
C11orf1Q9H5F2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.27■□□□□ 0.19
C11orf1Q9H5F2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf1Q9H5F2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
C11orf1Q9H5F2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.26■□□□□ 0.19
C11orf1Q9H5F2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
C11orf1Q9H5F2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf1Q9H5F2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms