Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ALX4Q9H161 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ALX4Q9H161 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALX4Q9H161 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ALX4Q9H161 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ALX4Q9H161 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ALX4Q9H161 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALX4Q9H161 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALX4Q9H161 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALX4Q9H161 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALX4Q9H161 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALX4Q9H161 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ALX4Q9H161 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALX4Q9H161 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
ALX4Q9H161 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALX4Q9H161 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALX4Q9H161 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALX4Q9H161 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALX4Q9H161 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.15■□□□□ 0.34
ALX4Q9H161 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.15■□□□□ 0.34
ALX4Q9H161 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.15■□□□□ 0.34
ALX4Q9H161 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.15■□□□□ 0.34
ALX4Q9H161 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.15■□□□□ 0.34
ALX4Q9H161 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALX4Q9H161 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALX4Q9H161 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALX4Q9H161 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ALX4Q9H161 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALX4Q9H161 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.15■□□□□ 0.34
ALX4Q9H161 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ALX4Q9H161 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ALX4Q9H161 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
ALX4Q9H161 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ALX4Q9H161 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
ALX4Q9H161 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALX4Q9H161 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALX4Q9H161 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALX4Q9H161 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ALX4Q9H161 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALX4Q9H161 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ALX4Q9H161 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.14■□□□□ 0.33
ALX4Q9H161 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.14■□□□□ 0.33
ALX4Q9H161 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALX4Q9H161 AL136967.2-201ENST00000623968 743 ntBASIC17.14■□□□□ 0.33
ALX4Q9H161 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ALX4Q9H161 BX005040.4-201ENST00000637145 1518 ntBASIC17.14■□□□□ 0.33
ALX4Q9H161 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.14■□□□□ 0.33
ALX4Q9H161 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ALX4Q9H161 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALX4Q9H161 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALX4Q9H161 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALX4Q9H161 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALX4Q9H161 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.13■□□□□ 0.33
ALX4Q9H161 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ALX4Q9H161 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ALX4Q9H161 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
ALX4Q9H161 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALX4Q9H161 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALX4Q9H161 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALX4Q9H161 MIR939-201ENST00000401314 82 ntBASIC17.13■□□□□ 0.33
ALX4Q9H161 AC099791.1-201ENST00000416440 715 ntBASIC17.13■□□□□ 0.33
ALX4Q9H161 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
ALX4Q9H161 SLC47A1P1-202ENST00000449666 945 ntBASIC17.13■□□□□ 0.33
ALX4Q9H161 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ALX4Q9H161 AC010525.1-201ENST00000585559 441 ntBASIC17.13■□□□□ 0.33
ALX4Q9H161 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALX4Q9H161 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALX4Q9H161 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.13■□□□□ 0.33
ALX4Q9H161 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ALX4Q9H161 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALX4Q9H161 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.13■□□□□ 0.33
ALX4Q9H161 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALX4Q9H161 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALX4Q9H161 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALX4Q9H161 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALX4Q9H161 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ALX4Q9H161 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALX4Q9H161 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.12■□□□□ 0.33
ALX4Q9H161 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
ALX4Q9H161 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.12■□□□□ 0.33
ALX4Q9H161 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALX4Q9H161 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALX4Q9H161 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALX4Q9H161 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ALX4Q9H161 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.12■□□□□ 0.33
ALX4Q9H161 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALX4Q9H161 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ALX4Q9H161 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALX4Q9H161 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.12■□□□□ 0.33
ALX4Q9H161 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.12■□□□□ 0.33
ALX4Q9H161 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.12■□□□□ 0.33
ALX4Q9H161 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.12■□□□□ 0.33
ALX4Q9H161 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.12■□□□□ 0.33
ALX4Q9H161 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALX4Q9H161 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALX4Q9H161 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ALX4Q9H161 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ALX4Q9H161 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALX4Q9H161 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALX4Q9H161 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms