Protein–RNA interactions for Protein: Q9H0R4

HDHD2, Haloacid dehalogenase-like hydrolase domain-containing protein 2, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2Q9H0R4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD2Q9H0R4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD2Q9H0R4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD2Q9H0R4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD2Q9H0R4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD2Q9H0R4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD2Q9H0R4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
HDHD2Q9H0R4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD2Q9H0R4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD2Q9H0R4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.37■□□□□ 0.53
HDHD2Q9H0R4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDHD2Q9H0R4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 AL049796.1-201ENST00000565336 1766 ntBASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HDHD2Q9H0R4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 AC123595.1-201ENST00000440769 1046 ntBASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HDHD2Q9H0R4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 AP005212.1-201ENST00000581547 1997 ntBASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 YBX1P1-201ENST00000445822 960 ntBASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDHD2Q9H0R4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HDHD2Q9H0R4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HDHD2Q9H0R4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HDHD2Q9H0R4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HDHD2Q9H0R4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.33■□□□□ 0.52
HDHD2Q9H0R4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HDHD2Q9H0R4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.33■□□□□ 0.52
HDHD2Q9H0R4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HDHD2Q9H0R4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.33■□□□□ 0.52
HDHD2Q9H0R4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.33■□□□□ 0.52
HDHD2Q9H0R4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HDHD2Q9H0R4 AL020996.1-203ENST00000536896 2307 ntBASIC18.33■□□□□ 0.52
HDHD2Q9H0R4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HDHD2Q9H0R4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HDHD2Q9H0R4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.33■□□□□ 0.52
HDHD2Q9H0R4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HDHD2Q9H0R4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HDHD2Q9H0R4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HDHD2Q9H0R4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD2Q9H0R4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD2Q9H0R4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD2Q9H0R4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD2Q9H0R4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD2Q9H0R4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD2Q9H0R4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD2Q9H0R4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.32■□□□□ 0.52
HDHD2Q9H0R4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD2Q9H0R4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD2Q9H0R4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD2Q9H0R4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms