Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.46■□□□□ 0.23
NKX6-2Q9C056 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.46■□□□□ 0.23
NKX6-2Q9C056 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-2Q9C056 BHLHE23-202ENST00000612929 1109 ntBASIC16.46■□□□□ 0.23
NKX6-2Q9C056 U85056.1-201ENST00000616429 682 ntBASIC16.46■□□□□ 0.23
NKX6-2Q9C056 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.46■□□□□ 0.23
NKX6-2Q9C056 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-2Q9C056 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-2Q9C056 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-2Q9C056 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-2Q9C056 AC026471.6-201ENST00000622954 1905 ntBASIC16.46■□□□□ 0.23
NKX6-2Q9C056 AC018470.1-201ENST00000624790 3129 ntBASIC16.46■□□□□ 0.23
NKX6-2Q9C056 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
NKX6-2Q9C056 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-2Q9C056 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-2Q9C056 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NKX6-2Q9C056 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
NKX6-2Q9C056 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.46■□□□□ 0.22
NKX6-2Q9C056 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.46■□□□□ 0.22
NKX6-2Q9C056 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 PLK5-205ENST00000642079 1969 ntBASIC16.45■□□□□ 0.22
NKX6-2Q9C056 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NKX6-2Q9C056 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 KRT18P60-201ENST00000312876 1297 ntBASIC16.44■□□□□ 0.22
NKX6-2Q9C056 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.44■□□□□ 0.22
NKX6-2Q9C056 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-2Q9C056 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms