Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EBF4Q9BQW3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.83■□□□□ 0.76
EBF4Q9BQW3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
EBF4Q9BQW3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 RARRES2P11-201ENST00000635158 484 ntBASIC19.82■□□□□ 0.76
EBF4Q9BQW3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.82■□□□□ 0.76
EBF4Q9BQW3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 AC004408.2-201ENST00000623613 2777 ntBASIC19.81■□□□□ 0.76
EBF4Q9BQW3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 MIR2861-201ENST00000636310 90 ntBASIC19.81■□□□□ 0.76
EBF4Q9BQW3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.81■□□□□ 0.76
EBF4Q9BQW3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 TNXA-203ENST00000507684 2038 ntBASIC19.8■□□□□ 0.76
EBF4Q9BQW3 AL691432.2-201ENST00000607222 2038 ntBASIC19.8■□□□□ 0.76
EBF4Q9BQW3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 UNC93B3-201ENST00000308076 687 ntBASIC19.8■□□□□ 0.76
EBF4Q9BQW3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EBF4Q9BQW3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.79■□□□□ 0.76
EBF4Q9BQW3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EBF4Q9BQW3 TSPY26P-201ENST00000476365 1326 ntBASIC19.79■□□□□ 0.76
EBF4Q9BQW3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EBF4Q9BQW3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
EBF4Q9BQW3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.79■□□□□ 0.76
EBF4Q9BQW3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EBF4Q9BQW3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.79■□□□□ 0.76
EBF4Q9BQW3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
EBF4Q9BQW3 AC024257.2-201ENST00000549699 147 ntBASIC19.79■□□□□ 0.76
EBF4Q9BQW3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.79■□□□□ 0.76
EBF4Q9BQW3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
EBF4Q9BQW3 AC005332.7-201ENST00000614046 2005 ntBASIC19.79■□□□□ 0.76
EBF4Q9BQW3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EBF4Q9BQW3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.79■□□□□ 0.76
EBF4Q9BQW3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EBF4Q9BQW3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.79■□□□□ 0.76
EBF4Q9BQW3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
EBF4Q9BQW3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EBF4Q9BQW3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EBF4Q9BQW3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.78■□□□□ 0.76
EBF4Q9BQW3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EBF4Q9BQW3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EBF4Q9BQW3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EBF4Q9BQW3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.78■□□□□ 0.76
EBF4Q9BQW3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
EBF4Q9BQW3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
EBF4Q9BQW3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
EBF4Q9BQW3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EBF4Q9BQW3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EBF4Q9BQW3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EBF4Q9BQW3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EBF4Q9BQW3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EBF4Q9BQW3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EBF4Q9BQW3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms