Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 CDV3P1-201ENST00000471403 739 ntBASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 AC079630.1-202ENST00000618127 1840 ntBASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP3BQ96NU0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP3BQ96NU0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP3BQ96NU0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.49■□□□□ 0.71
CNTNAP3BQ96NU0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CNTNAP3BQ96NU0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP3BQ96NU0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CNTNAP3BQ96NU0 AL353807.1-201ENST00000427475 662 ntBASIC19.49■□□□□ 0.71
CNTNAP3BQ96NU0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.49■□□□□ 0.71
CNTNAP3BQ96NU0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP3BQ96NU0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP3BQ96NU0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP3BQ96NU0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CNTNAP3BQ96NU0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.49■□□□□ 0.71
CNTNAP3BQ96NU0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CNTNAP3BQ96NU0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
CNTNAP3BQ96NU0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 AP006587.3-201ENST00000525742 1516 ntBASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 PCED1CP-201ENST00000419887 785 ntBASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 FDX1P1-201ENST00000449115 551 ntBASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTNAP3BQ96NU0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 AC128688.1-201ENST00000487626 519 ntBASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 AC073195.1-201ENST00000607241 877 ntBASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CNTNAP3BQ96NU0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 AC091799.1-201ENST00000422823 811 ntBASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 AC012313.10-201ENST00000623509 926 ntBASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 AL353803.4-201ENST00000565882 1934 ntBASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms