Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTN4IP1Q8WWV3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RTN4IP1Q8WWV3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
RTN4IP1Q8WWV3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RTN4IP1Q8WWV3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.1■□□□□ 0.33
RTN4IP1Q8WWV3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.1■□□□□ 0.33
RTN4IP1Q8WWV3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTN4IP1Q8WWV3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 EEF1DP3-203ENST00000566025 782 ntBASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 TERF1P2-201ENST00000583350 1212 ntBASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 AC053503.5-201ENST00000601508 636 ntBASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTN4IP1Q8WWV3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RTN4IP1Q8WWV3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RTN4IP1Q8WWV3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RTN4IP1Q8WWV3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.08■□□□□ 0.33
RTN4IP1Q8WWV3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RTN4IP1Q8WWV3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTN4IP1Q8WWV3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RTN4IP1Q8WWV3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTN4IP1Q8WWV3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.08■□□□□ 0.32
RTN4IP1Q8WWV3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.08■□□□□ 0.32
RTN4IP1Q8WWV3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.08■□□□□ 0.32
RTN4IP1Q8WWV3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTN4IP1Q8WWV3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.08■□□□□ 0.32
RTN4IP1Q8WWV3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.08■□□□□ 0.32
RTN4IP1Q8WWV3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTN4IP1Q8WWV3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.08■□□□□ 0.32
RTN4IP1Q8WWV3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTN4IP1Q8WWV3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTN4IP1Q8WWV3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RTN4IP1Q8WWV3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTN4IP1Q8WWV3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 CCDC92B-201ENST00000575506 885 ntBASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTN4IP1Q8WWV3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 KRT18P14-201ENST00000534205 1250 ntBASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTN4IP1Q8WWV3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 AC019069.1-201ENST00000610008 1333 ntBASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms