Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNIH3Q8TBE1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNIH3Q8TBE1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNIH3Q8TBE1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CNIH3Q8TBE1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNIH3Q8TBE1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.58■□□□□ 0.57
CNIH3Q8TBE1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CNIH3Q8TBE1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.58■□□□□ 0.56
CNIH3Q8TBE1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.58■□□□□ 0.56
CNIH3Q8TBE1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.58■□□□□ 0.56
CNIH3Q8TBE1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNIH3Q8TBE1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.58■□□□□ 0.56
CNIH3Q8TBE1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CNIH3Q8TBE1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
CNIH3Q8TBE1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 SRD5A1P1-201ENST00000442297 786 ntBASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNIH3Q8TBE1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 AC055733.4-201ENST00000638462 1354 ntBASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNIH3Q8TBE1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 SERBP1P1-201ENST00000396021 1160 ntBASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNIH3Q8TBE1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms