Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.14■□□□□ 0.65
PSD4Q8NDX1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.14■□□□□ 0.65
PSD4Q8NDX1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.13■□□□□ 0.65
PSD4Q8NDX1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.13■□□□□ 0.65
PSD4Q8NDX1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PSD4Q8NDX1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PSD4Q8NDX1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PSD4Q8NDX1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PSD4Q8NDX1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PSD4Q8NDX1 AL591742.1-201ENST00000604433 565 ntBASIC19.13■□□□□ 0.65
PSD4Q8NDX1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PSD4Q8NDX1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PSD4Q8NDX1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.13■□□□□ 0.65
PSD4Q8NDX1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PSD4Q8NDX1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PSD4Q8NDX1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.13■□□□□ 0.65
PSD4Q8NDX1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PSD4Q8NDX1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PSD4Q8NDX1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 AC245052.3-201ENST00000450182 901 ntBASIC19.12■□□□□ 0.65
PSD4Q8NDX1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 AC142086.2-201ENST00000569753 217 ntBASIC19.12■□□□□ 0.65
PSD4Q8NDX1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 OR10C1-204ENST00000622521 1039 ntBASIC19.12■□□□□ 0.65
PSD4Q8NDX1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PSD4Q8NDX1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 AL162412.1-201ENST00000567129 965 ntBASIC19.11■□□□□ 0.65
PSD4Q8NDX1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PSD4Q8NDX1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.1■□□□□ 0.65
PSD4Q8NDX1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.09■□□□□ 0.65
PSD4Q8NDX1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PSD4Q8NDX1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PSD4Q8NDX1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PSD4Q8NDX1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms