Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01555Q8NAE3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01555Q8NAE3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.64■□□□□ 0.73
LINC01555Q8NAE3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.64■□□□□ 0.73
LINC01555Q8NAE3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01555Q8NAE3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01555Q8NAE3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.64■□□□□ 0.73
LINC01555Q8NAE3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01555Q8NAE3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01555Q8NAE3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01555Q8NAE3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01555Q8NAE3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 AC097658.1-201ENST00000475555 843 ntBASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 C2orf69P4-201ENST00000565394 541 ntBASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC01555Q8NAE3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01555Q8NAE3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01555Q8NAE3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01555Q8NAE3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.6■□□□□ 0.73
LINC01555Q8NAE3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.6■□□□□ 0.73
LINC01555Q8NAE3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LINC01555Q8NAE3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LINC01555Q8NAE3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01555Q8NAE3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01555Q8NAE3 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.6■□□□□ 0.73
LINC01555Q8NAE3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.6■□□□□ 0.73
LINC01555Q8NAE3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.6■□□□□ 0.73
LINC01555Q8NAE3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LINC01555Q8NAE3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LINC01555Q8NAE3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.6■□□□□ 0.73
LINC01555Q8NAE3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LINC01555Q8NAE3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.6■□□□□ 0.73
LINC01555Q8NAE3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01555Q8NAE3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
LINC01555Q8NAE3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01555Q8NAE3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01555Q8NAE3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01555Q8NAE3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01555Q8NAE3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01555Q8NAE3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC01555Q8NAE3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC01555Q8NAE3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01555Q8NAE3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.59■□□□□ 0.73
LINC01555Q8NAE3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.59■□□□□ 0.73
LINC01555Q8NAE3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01555Q8NAE3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01555Q8NAE3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC01555Q8NAE3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC01555Q8NAE3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC01555Q8NAE3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC01555Q8NAE3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LINC01555Q8NAE3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.58■□□□□ 0.73
LINC01555Q8NAE3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC01555Q8NAE3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LINC01555Q8NAE3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LINC01555Q8NAE3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms