Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 IGHV3-19-201ENST00000521488 291 ntBASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 AC126544.1-201ENST00000580842 1059 ntBASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 BX323043.1-201ENST00000641006 1765 ntBASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 BCL2-203ENST00000589955 5011 ntBASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71LQ8N9Z2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC71LQ8N9Z2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.3
CCDC71LQ8N9Z2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC71LQ8N9Z2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 AC053503.5-201ENST00000601508 636 ntBASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 AL035685.1-201ENST00000636663 812 ntBASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71LQ8N9Z2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 AC018445.3-201ENST00000624177 1945 ntBASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 AC233992.3-201ENST00000607491 485 ntBASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71LQ8N9Z2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms