Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
NIPAL3Q6P499 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.52■□□□□ 0.55
NIPAL3Q6P499 AC011484.1-201ENST00000377652 1995 ntBASIC18.51■□□□□ 0.55
NIPAL3Q6P499 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 AC007952.6-201ENST00000573168 2673 ntBASIC18.51■□□□□ 0.55
NIPAL3Q6P499 AC003957.1-201ENST00000625108 2673 ntBASIC18.51■□□□□ 0.55
NIPAL3Q6P499 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 KRT18P11-201ENST00000435214 1283 ntBASIC18.51■□□□□ 0.55
NIPAL3Q6P499 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.51■□□□□ 0.55
NIPAL3Q6P499 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 AC245052.3-201ENST00000450182 901 ntBASIC18.5■□□□□ 0.55
NIPAL3Q6P499 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NIPAL3Q6P499 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 AC112907.3-201ENST00000577781 2400 ntBASIC18.49■□□□□ 0.55
NIPAL3Q6P499 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.49■□□□□ 0.55
NIPAL3Q6P499 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NIPAL3Q6P499 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NIPAL3Q6P499 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NIPAL3Q6P499 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.48■□□□□ 0.55
NIPAL3Q6P499 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.48■□□□□ 0.55
NIPAL3Q6P499 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NIPAL3Q6P499 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.48■□□□□ 0.55
NIPAL3Q6P499 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.48■□□□□ 0.55
NIPAL3Q6P499 SLC7A5P1-201ENST00000568957 537 ntBASIC18.48■□□□□ 0.55
NIPAL3Q6P499 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.48■□□□□ 0.55
NIPAL3Q6P499 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.48■□□□□ 0.55
NIPAL3Q6P499 AC099778.1-201ENST00000568593 1911 ntBASIC18.48■□□□□ 0.55
NIPAL3Q6P499 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NIPAL3Q6P499 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NIPAL3Q6P499 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms