Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.43■□□□□ 0.7
PRAMEF17Q5VTA0 HLA-B-256ENST00000639848 1089 ntBASIC19.43■□□□□ 0.7
PRAMEF17Q5VTA0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF17Q5VTA0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF17Q5VTA0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF17Q5VTA0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.43■□□□□ 0.7
PRAMEF17Q5VTA0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF17Q5VTA0 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.43■□□□□ 0.7
PRAMEF17Q5VTA0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
PRAMEF17Q5VTA0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.43■□□□□ 0.7
PRAMEF17Q5VTA0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF17Q5VTA0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF17Q5VTA0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.43■□□□□ 0.7
PRAMEF17Q5VTA0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF17Q5VTA0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 AC087633.2-202ENST00000565166 1439 ntBASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 AC092368.3-202ENST00000574180 1591 ntBASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 PNMA6B-201ENST00000538162 1200 ntBASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF17Q5VTA0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF17Q5VTA0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 C2orf69P4-201ENST00000565394 541 ntBASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 AC073648.6-201ENST00000641589 218 ntBASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 AC011484.1-201ENST00000377652 1995 ntBASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 FEM1AP4-201ENST00000443167 1987 ntBASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.4■□□□□ 0.7
PRAMEF17Q5VTA0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PRAMEF17Q5VTA0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 AL049796.1-201ENST00000565336 1766 ntBASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF17Q5VTA0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF17Q5VTA0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF17Q5VTA0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF17Q5VTA0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms