Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 AC016769.1-201ENST00000409132 1010 ntBASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 AC006015.1-201ENST00000429970 570 ntBASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 TERF1P5-201ENST00000477545 1207 ntBASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.67■□□□□ 0.74
DEPDC1Q5TB30 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.66■□□□□ 0.74
DEPDC1Q5TB30 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 AC007225.1-201ENST00000566331 1836 ntBASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.65■□□□□ 0.74
DEPDC1Q5TB30 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
DEPDC1Q5TB30 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.64■□□□□ 0.74
DEPDC1Q5TB30 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
DEPDC1Q5TB30 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 AC007322.3-201ENST00000426526 701 ntBASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 AC022517.1-201ENST00000592429 346 ntBASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 AC027702.1-201ENST00000563810 1770 ntBASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DEPDC1Q5TB30 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1Q5TB30 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1Q5TB30 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1Q5TB30 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1Q5TB30 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1Q5TB30 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1Q5TB30 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1Q5TB30 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1Q5TB30 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1Q5TB30 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1Q5TB30 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
DEPDC1Q5TB30 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1Q5TB30 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
DEPDC1Q5TB30 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.63■□□□□ 0.73
DEPDC1Q5TB30 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1Q5TB30 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms