Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01554Q52M75 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC01554Q52M75 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01554Q52M75 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC01554Q52M75 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
LINC01554Q52M75 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01554Q52M75 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01554Q52M75 AL592295.1-201ENST00000400984 884 ntBASIC10.21□□□□□ -0.77
LINC01554Q52M75 RPS2P7-201ENST00000447334 885 ntBASIC10.21□□□□□ -0.77
LINC01554Q52M75 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01554Q52M75 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
LINC01554Q52M75 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
LINC01554Q52M75 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01554Q52M75 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC10.21□□□□□ -0.78
LINC01554Q52M75 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC01554Q52M75 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC10.21□□□□□ -0.78
LINC01554Q52M75 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
LINC01554Q52M75 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01554Q52M75 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC01554Q52M75 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01554Q52M75 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01554Q52M75 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01554Q52M75 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC01554Q52M75 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01554Q52M75 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01554Q52M75 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01554Q52M75 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC01554Q52M75 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01554Q52M75 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01554Q52M75 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC10.21□□□□□ -0.78
LINC01554Q52M75 PCDHB18P-201ENST00000524813 2368 ntBASIC10.21□□□□□ -0.78
LINC01554Q52M75 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01554Q52M75 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01554Q52M75 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01554Q52M75 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 MBP-237ENST00000579129 1052 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01554Q52M75 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
LINC01554Q52M75 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC01554Q52M75 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
LINC01554Q52M75 SMG8-203ENST00000578922 2178 ntBASIC10.19□□□□□ -0.78
LINC01554Q52M75 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
LINC01554Q52M75 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC10.19□□□□□ -0.78
LINC01554Q52M75 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
LINC01554Q52M75 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
LINC01554Q52M75 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms