Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD47Q08722 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD47Q08722 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CD47Q08722 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD47Q08722 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD47Q08722 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.87■□□□□ 0.61
CD47Q08722 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD47Q08722 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.87■□□□□ 0.61
CD47Q08722 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.87■□□□□ 0.61
CD47Q08722 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CD47Q08722 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CD47Q08722 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.87■□□□□ 0.61
CD47Q08722 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CD47Q08722 BX005040.4-201ENST00000637145 1518 ntBASIC18.87■□□□□ 0.61
CD47Q08722 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.87■□□□□ 0.61
CD47Q08722 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
CD47Q08722 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.87■□□□□ 0.61
CD47Q08722 AP000974.1-201ENST00000623909 2387 ntBASIC18.86■□□□□ 0.61
CD47Q08722 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD47Q08722 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.86■□□□□ 0.61
CD47Q08722 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD47Q08722 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD47Q08722 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD47Q08722 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD47Q08722 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD47Q08722 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD47Q08722 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.86■□□□□ 0.61
CD47Q08722 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CD47Q08722 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD47Q08722 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.86■□□□□ 0.61
CD47Q08722 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD47Q08722 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD47Q08722 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD47Q08722 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD47Q08722 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CD47Q08722 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD47Q08722 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD47Q08722 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD47Q08722 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.85■□□□□ 0.61
CD47Q08722 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.85■□□□□ 0.61
CD47Q08722 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD47Q08722 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.85■□□□□ 0.61
CD47Q08722 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.85■□□□□ 0.61
CD47Q08722 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CD47Q08722 AL158211.5-201ENST00000623583 2518 ntBASIC18.85■□□□□ 0.61
CD47Q08722 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.85■□□□□ 0.61
CD47Q08722 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
CD47Q08722 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD47Q08722 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD47Q08722 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD47Q08722 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD47Q08722 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD47Q08722 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CD47Q08722 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.84■□□□□ 0.61
CD47Q08722 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD47Q08722 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.84■□□□□ 0.61
CD47Q08722 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD47Q08722 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CD47Q08722 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.84■□□□□ 0.61
CD47Q08722 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CD47Q08722 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.84■□□□□ 0.61
CD47Q08722 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.84■□□□□ 0.61
CD47Q08722 AC005837.3-201ENST00000612163 286 ntBASIC18.84■□□□□ 0.61
CD47Q08722 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD47Q08722 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.84■□□□□ 0.61
CD47Q08722 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.84■□□□□ 0.61
CD47Q08722 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.84■□□□□ 0.61
CD47Q08722 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD47Q08722 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD47Q08722 TNXA-203ENST00000507684 2038 ntBASIC18.83■□□□□ 0.61
CD47Q08722 AC005224.4-201ENST00000583262 1652 ntBASIC18.83■□□□□ 0.61
CD47Q08722 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD47Q08722 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD47Q08722 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.83■□□□□ 0.61
CD47Q08722 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD47Q08722 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.83■□□□□ 0.6
CD47Q08722 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
CD47Q08722 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CD47Q08722 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.83■□□□□ 0.6
CD47Q08722 AC012414.1-201ENST00000556676 535 ntBASIC18.83■□□□□ 0.6
CD47Q08722 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.83■□□□□ 0.6
CD47Q08722 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD47Q08722 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD47Q08722 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD47Q08722 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.83■□□□□ 0.6
CD47Q08722 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD47Q08722 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.83■□□□□ 0.6
CD47Q08722 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.83■□□□□ 0.6
CD47Q08722 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD47Q08722 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CD47Q08722 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.83■□□□□ 0.6
CD47Q08722 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CD47Q08722 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD47Q08722 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD47Q08722 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CD47Q08722 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD47Q08722 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.82■□□□□ 0.6
CD47Q08722 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CD47Q08722 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD47Q08722 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms