Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS3AP61247 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS3AP61247 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS3AP61247 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS3AP61247 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.99■□□□□ 0.63
RPS3AP61247 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS3AP61247 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPS3AP61247 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.99■□□□□ 0.63
RPS3AP61247 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.99■□□□□ 0.63
RPS3AP61247 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPS3AP61247 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPS3AP61247 BID-214ENST00000617586 542 ntTSL 5 BASIC18.99■□□□□ 0.63
RPS3AP61247 AC092437.1-201ENST00000624794 1048 ntBASIC18.99■□□□□ 0.63
RPS3AP61247 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.99■□□□□ 0.63
RPS3AP61247 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.99■□□□□ 0.63
RPS3AP61247 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPS3AP61247 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPS3AP61247 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS3AP61247 AC003102.1-202ENST00000563394 1796 ntBASIC18.98■□□□□ 0.63
RPS3AP61247 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS3AP61247 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RPS3AP61247 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS3AP61247 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.98■□□□□ 0.63
RPS3AP61247 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RPS3AP61247 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.98■□□□□ 0.63
RPS3AP61247 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.98■□□□□ 0.63
RPS3AP61247 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS3AP61247 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS3AP61247 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS3AP61247 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPS3AP61247 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.98■□□□□ 0.63
RPS3AP61247 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.98■□□□□ 0.63
RPS3AP61247 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.98■□□□□ 0.63
RPS3AP61247 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS3AP61247 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
RPS3AP61247 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS3AP61247 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS3AP61247 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS3AP61247 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS3AP61247 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS3AP61247 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPS3AP61247 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS3AP61247 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS3AP61247 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RPS3AP61247 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RPS3AP61247 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
RPS3AP61247 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPS3AP61247 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS3AP61247 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS3AP61247 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS3AP61247 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPS3AP61247 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.97■□□□□ 0.63
RPS3AP61247 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS3AP61247 POU5F1P4-201ENST00000413175 1085 ntBASIC18.97■□□□□ 0.63
RPS3AP61247 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.97■□□□□ 0.63
RPS3AP61247 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.97■□□□□ 0.63
RPS3AP61247 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS3AP61247 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.97■□□□□ 0.63
RPS3AP61247 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.97■□□□□ 0.63
RPS3AP61247 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS3AP61247 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS3AP61247 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPS3AP61247 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS3AP61247 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RPS3AP61247 BX323043.1-201ENST00000641006 1765 ntBASIC18.96■□□□□ 0.63
RPS3AP61247 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.96■□□□□ 0.63
RPS3AP61247 AC018445.3-201ENST00000624177 1945 ntBASIC18.96■□□□□ 0.63
RPS3AP61247 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS3AP61247 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.96■□□□□ 0.63
RPS3AP61247 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.96■□□□□ 0.63
RPS3AP61247 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS3AP61247 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS3AP61247 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.96■□□□□ 0.63
RPS3AP61247 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
RPS3AP61247 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS3AP61247 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS3AP61247 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.96■□□□□ 0.63
RPS3AP61247 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.96■□□□□ 0.63
RPS3AP61247 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS3AP61247 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.96■□□□□ 0.63
RPS3AP61247 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS3AP61247 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS3AP61247 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.96■□□□□ 0.63
RPS3AP61247 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS3AP61247 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS3AP61247 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS3AP61247 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS3AP61247 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS3AP61247 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS3AP61247 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS3AP61247 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS3AP61247 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS3AP61247 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS3AP61247 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.95■□□□□ 0.62
RPS3AP61247 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RPS3AP61247 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
RPS3AP61247 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS3AP61247 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS3AP61247 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.95■□□□□ 0.62
RPS3AP61247 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms