Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PER3P56645 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PER3P56645 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PER3P56645 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.77■□□□□ 0.6
PER3P56645 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PER3P56645 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.77■□□□□ 0.6
PER3P56645 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.77■□□□□ 0.6
PER3P56645 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.77■□□□□ 0.6
PER3P56645 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PER3P56645 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PER3P56645 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PER3P56645 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.77■□□□□ 0.6
PER3P56645 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.77■□□□□ 0.6
PER3P56645 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.77■□□□□ 0.6
PER3P56645 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.77■□□□□ 0.6
PER3P56645 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PER3P56645 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PER3P56645 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PER3P56645 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PER3P56645 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
PER3P56645 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PER3P56645 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.76■□□□□ 0.59
PER3P56645 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.76■□□□□ 0.59
PER3P56645 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 AC080038.3-201ENST00000623346 1952 ntBASIC18.76■□□□□ 0.59
PER3P56645 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.76■□□□□ 0.59
PER3P56645 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.76■□□□□ 0.59
PER3P56645 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PER3P56645 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.76■□□□□ 0.59
PER3P56645 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.76■□□□□ 0.59
PER3P56645 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
PER3P56645 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PER3P56645 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PER3P56645 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.76■□□□□ 0.59
PER3P56645 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PER3P56645 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.76■□□□□ 0.59
PER3P56645 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PER3P56645 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.75■□□□□ 0.59
PER3P56645 KRT16P2-201ENST00000414673 1423 ntBASIC18.75■□□□□ 0.59
PER3P56645 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PER3P56645 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PER3P56645 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PER3P56645 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PER3P56645 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PER3P56645 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.75■□□□□ 0.59
PER3P56645 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.75■□□□□ 0.59
PER3P56645 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.75■□□□□ 0.59
PER3P56645 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.75■□□□□ 0.59
PER3P56645 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PER3P56645 FAM197Y4-202ENST00000622692 608 ntBASIC18.75■□□□□ 0.59
PER3P56645 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PER3P56645 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
PER3P56645 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PER3P56645 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.75■□□□□ 0.59
PER3P56645 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PER3P56645 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PER3P56645 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PER3P56645 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PER3P56645 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PER3P56645 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PER3P56645 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PER3P56645 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PER3P56645 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PER3P56645 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.74■□□□□ 0.59
PER3P56645 AC003102.1-202ENST00000563394 1796 ntBASIC18.74■□□□□ 0.59
PER3P56645 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PER3P56645 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.74■□□□□ 0.59
PER3P56645 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.74■□□□□ 0.59
PER3P56645 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.74■□□□□ 0.59
PER3P56645 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.74■□□□□ 0.59
PER3P56645 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.74■□□□□ 0.59
PER3P56645 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PER3P56645 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PER3P56645 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.74■□□□□ 0.59
PER3P56645 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PER3P56645 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PER3P56645 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PER3P56645 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PER3P56645 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PER3P56645 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PER3P56645 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PER3P56645 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PER3P56645 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PER3P56645 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PER3P56645 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.73■□□□□ 0.59
PER3P56645 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms