Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.96■□□□□ 0.95
PMS2P54278 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS2P54278 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PMS2P54278 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.96■□□□□ 0.95
PMS2P54278 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.96■□□□□ 0.95
PMS2P54278 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS2P54278 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS2P54278 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PMS2P54278 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS2P54278 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS2P54278 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PMS2P54278 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PMS2P54278 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.96■□□□□ 0.95
PMS2P54278 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PMS2P54278 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PMS2P54278 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.96■□□□□ 0.95
PMS2P54278 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS2P54278 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS2P54278 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PMS2P54278 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.96■□□□□ 0.95
PMS2P54278 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.96■□□□□ 0.95
PMS2P54278 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PMS2P54278 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS2P54278 AC005224.4-201ENST00000583262 1652 ntBASIC20.96■□□□□ 0.95
PMS2P54278 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMS2P54278 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PMS2P54278 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMS2P54278 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PMS2P54278 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PMS2P54278 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
PMS2P54278 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMS2P54278 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.95■□□□□ 0.94
PMS2P54278 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.95■□□□□ 0.94
PMS2P54278 YBX1P1-201ENST00000445822 960 ntBASIC20.95■□□□□ 0.94
PMS2P54278 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PMS2P54278 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PMS2P54278 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.95■□□□□ 0.94
PMS2P54278 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PMS2P54278 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.95■□□□□ 0.94
PMS2P54278 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.95■□□□□ 0.94
PMS2P54278 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.94■□□□□ 0.94
PMS2P54278 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PMS2P54278 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS2P54278 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS2P54278 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PMS2P54278 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PMS2P54278 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS2P54278 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS2P54278 AC125437.2-201ENST00000625180 2167 ntBASIC20.94■□□□□ 0.94
PMS2P54278 BX323043.1-201ENST00000641006 1765 ntBASIC20.94■□□□□ 0.94
PMS2P54278 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS2P54278 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS2P54278 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS2P54278 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.94■□□□□ 0.94
PMS2P54278 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.94■□□□□ 0.94
PMS2P54278 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
PMS2P54278 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.94■□□□□ 0.94
PMS2P54278 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
PMS2P54278 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS2P54278 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PMS2P54278 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PMS2P54278 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS2P54278 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS2P54278 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PMS2P54278 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS2P54278 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS2P54278 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.93■□□□□ 0.94
PMS2P54278 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
PMS2P54278 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS2P54278 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.93■□□□□ 0.94
PMS2P54278 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PMS2P54278 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PMS2P54278 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.93■□□□□ 0.94
PMS2P54278 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS2P54278 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PMS2P54278 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
PMS2P54278 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.93■□□□□ 0.94
PMS2P54278 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PMS2P54278 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS2P54278 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.93■□□□□ 0.94
PMS2P54278 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS2P54278 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.92■□□□□ 0.94
PMS2P54278 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS2P54278 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.92■□□□□ 0.94
PMS2P54278 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PMS2P54278 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS2P54278 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PMS2P54278 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PMS2P54278 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS2P54278 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS2P54278 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS2P54278 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.92■□□□□ 0.94
PMS2P54278 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.92■□□□□ 0.94
PMS2P54278 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.92■□□□□ 0.94
PMS2P54278 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.92■□□□□ 0.94
PMS2P54278 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.92■□□□□ 0.94
PMS2P54278 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.92■□□□□ 0.94
PMS2P54278 AP004607.4-201ENST00000530158 1459 ntBASIC20.92■□□□□ 0.94
PMS2P54278 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS2P54278 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms